RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
SF3B3-207ENST00000566095 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
SF3B3-207ENST00000566095 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 M0R2C6 588 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 ZNF213O14771 459 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 USP5P45974 858 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 TRDNQ13061 729 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 ZNF589Q86UQ0 364 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 SLC51AQ86UW1 340 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 HSCBQ8IWL3 235 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
SF3B3-207ENST00000566095 RNF41Q9H4P4 317 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
SF3B3-207ENST00000566095 PSME4Q14997 1843 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 FZD9O00144 591 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 PSMD14O00487 310 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 RAD17O75943 681 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 USP17L8P0C7I0 530 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 BTDP43251 543 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 RASSF7Q02833 373 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 NECTIN1Q15223 517 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 CCDC129Q6ZRS4 1044 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 KIAA0825Q8IV33 1275 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 DPF2Q92785 391 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 SEC62Q99442 399 aaKnown RBP11.67□□□□□ -0.54
SF3B3-207ENST00000566095 TBC1D2Q9BYX2 928 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
SF3B3-207ENST00000566095 SRCAPQ6ZRS2 3230 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 YDJCA8MPS7 323 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 F8W031 263 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-207ENST00000566095 H7C1D1 291 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
SF3B3-207ENST00000566095 CRKP46108 304 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 CXCL9Q07325 125 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 DLGAP5Q15398 846 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 CREB3L3Q68CJ9 461 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 TEX11Q8IYF3 940 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 GPC2Q8N158 579 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 LCORLQ8N3X6 602 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 CHMP4CQ96CF2 233 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
SF3B3-207ENST00000566095 RNF181Q9P0P0 153 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 DAGLAQ9Y4D2 1042 aa11.66□□□□□ -0.54
SF3B3-207ENST00000566095 MYH2Q9UKX2 1941 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-207ENST00000566095 SLC27A2O14975 620 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
SF3B3-207ENST00000566095 PTH1RQ03431 593 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 ANKRD1Q15327 319 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 DIXDC1Q155Q3 683 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
SF3B3-207ENST00000566095 IFNL3Q8IZI9 196 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 CERS5Q8N5B7 392 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 INTS4Q96HW7 963 aaKnown RBP11.65□□□□□ -0.54
SF3B3-207ENST00000566095 KRT23Q9C075 422 aa11.65□□□□□ -0.54
SF3B3-207ENST00000566095 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
SF3B3-207ENST00000566095 DICER1Q9UPY3 1922 aaKnown RBP11.64□□□□□ -0.55
SF3B3-207ENST00000566095 FGAP02671 866 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 HLA-DOAP06340 250 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 TNNI2P48788 182 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 SCNN1DP51172 638 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 FBXL16Q8N461 479 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 MTMR14Q8NCE2 650 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 USP40Q9NVE5 1235 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
SF3B3-207ENST00000566095 MYO5AQ9Y4I1 1855 aaKnown RBP11.63□□□□□ -0.55
SF3B3-207ENST00000566095 GSG1L2A8MUP6 293 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-207ENST00000566095 YBX3P16989 372 aaKnown RBP eCLIP11.63□□□□□ -0.558e-10■□□□□ 10.7
SF3B3-207ENST00000566095 PDE4BQ07343 736 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
SF3B3-207ENST00000566095 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 FKBP1CQ5VVH2 108 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 MFSD6Q6ZSS7 791 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 ADGRA1Q86SQ6 560 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 NCOA7Q8NI08 942 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 GMLQ99445 158 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 TRIM34Q9BYJ4 488 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 IL25Q9H293 177 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 DHX36Q9H2U1 1008 aaKnown RBP11.63□□□□□ -0.55
SF3B3-207ENST00000566095 MCM9Q9NXL9 1143 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 SNX14Q9Y5W7 946 aa11.63□□□□□ -0.55
SF3B3-207ENST00000566095 SCN9AQ15858 1988 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 ENTPD3O75355 529 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
SF3B3-207ENST00000566095 FGD1P98174 961 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 VPS53Q5VIR6 699 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms