RNA–Protein interactions for RNA: ENST00000565334.5

CDH5-205, Transcript of cadherin 5, humanhuman

TSL 5

Gene CDH5, Length 2,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-205ENST00000565334 STK36Q9NRP7 1315 aa21.62■■□□□ 1.05
CDH5-205ENST00000565334 ZBTB43O43298 467 aa21.62■■□□□ 1.05
CDH5-205ENST00000565334 SF3A1Q15459 793 aaKnown RBP21.62■■□□□ 1.05
CDH5-205ENST00000565334 DNAJC25Q9H1X3 360 aa21.62■■□□□ 1.05
CDH5-205ENST00000565334 ANO10Q9NW15 660 aa21.62■■□□□ 1.05
CDH5-205ENST00000565334 R3HCC1Q9Y3T6 440 aaKnown RBP21.62■■□□□ 1.05
CDH5-205ENST00000565334 NEDD4P46934 1319 aa21.62■■□□□ 1.05
CDH5-205ENST00000565334 FAM177BA6PVY3 158 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 RBM10P98175 930 aaKnown RBP21.61■■□□□ 1.05
CDH5-205ENST00000565334 CHRNDQ07001 517 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 TTC12Q9H892 705 aaPredicted RBP21.61■■□□□ 1.05
CDH5-205ENST00000565334 BCL9LQ86UU0 1499 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
CDH5-205ENST00000565334 SPTLC2O15270 562 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 NOLC1Q14978 699 aaKnown RBP eCLIP21.61■■□□□ 1.05
CDH5-205ENST00000565334 TMEM67Q5HYA8 995 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 AKNAD1Q5T1N1 836 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 PLA2G4DQ86XP0 818 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 FMR1NBQ8N0W7 255 aaPredicted RBP21.61■■□□□ 1.05
CDH5-205ENST00000565334 STAG1Q8WVM7 1258 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 ALG1Q9BT22 464 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 LY9Q9HBG7 655 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 SPTLC3Q9NUV7 552 aa21.61■■□□□ 1.05
CDH5-205ENST00000565334 GSG1L2A8MUP6 293 aa21.6■■□□□ 1.05
CDH5-205ENST00000565334 GOLGA6L19H0YKK7 550 aa21.6■■□□□ 1.05
CDH5-205ENST00000565334 CDC25BP30305 580 aa21.6■■□□□ 1.05
CDH5-205ENST00000565334 SF3B3Q15393 1217 aaKnown RBP21.6■■□□□ 1.05
CDH5-205ENST00000565334 SARM1Q6SZW1 724 aa21.6■■□□□ 1.05
CDH5-205ENST00000565334 NFXL1Q6ZNB6 911 aa21.6■■□□□ 1.05
CDH5-205ENST00000565334 GNL3LQ9NVN8 582 aaKnown RBP21.6■■□□□ 1.05
CDH5-205ENST00000565334 PPFIA3O75145 1194 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 ZNF75DP51815 510 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 RCAN1P53805 252 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 ANO1Q5XXA6 986 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 WASF1Q92558 559 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 RNF41Q9H4P4 317 aaPredicted RBP21.59■■□□□ 1.05
CDH5-205ENST00000565334 ARMT1Q9H993 441 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 ZNF804BA4D1E1 1349 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 GOLGA8AA7E2F4 631 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 BCAMP50895 628 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 SART3Q15020 963 aaKnown RBP21.59■■□□□ 1.05
CDH5-205ENST00000565334 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 MFSD6Q6ZSS7 791 aa21.59■■□□□ 1.05
CDH5-205ENST00000565334 CCDC69A6NI79 296 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 UBE4AQ14139 1066 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 IQCB1Q15051 598 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 ANKRD18AQ8IVF6 992 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 TMTC2Q8N394 836 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 NAT10Q9H0A0 1025 aaKnown RBP21.58■■□□□ 1.05
CDH5-205ENST00000565334 SLC12A7Q9Y666 1083 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 CLIC4Q9Y696 253 aa21.58■■□□□ 1.05
CDH5-205ENST00000565334 IFIT3O14879 490 aaKnown RBP21.58■■□□□ 1.04
CDH5-205ENST00000565334 POLR3DP05423 398 aaPredicted RBP21.58■■□□□ 1.04
CDH5-205ENST00000565334 IARSP41252 1262 aaKnown RBP21.58■■□□□ 1.04
CDH5-205ENST00000565334 TRIM29Q14134 588 aa21.58■■□□□ 1.04
CDH5-205ENST00000565334 ZNF830Q96NB3 372 aaPredicted RBP21.58■■□□□ 1.04
CDH5-205ENST00000565334 TRIM5Q9C035 493 aa21.58■■□□□ 1.04
CDH5-205ENST00000565334 LRP2BPQ9P2M1 347 aa21.58■■□□□ 1.04
CDH5-205ENST00000565334 DENND2AQ9ULE3 1009 aa21.58■■□□□ 1.04
CDH5-205ENST00000565334 SLC4A4Q9Y6R1 1079 aa21.58■■□□□ 1.04
CDH5-205ENST00000565334 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
CDH5-205ENST00000565334 TDO2P48775 406 aa21.57■■□□□ 1.04
CDH5-205ENST00000565334 NTRK3Q16288 839 aa21.57■■□□□ 1.04
CDH5-205ENST00000565334 RAB11FIP4Q86YS3 637 aa21.57■■□□□ 1.04
CDH5-205ENST00000565334 JMYQ8N9B5 988 aa21.57■■□□□ 1.04
CDH5-205ENST00000565334 KRT40Q6A162 431 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 MICU3Q86XE3 530 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 CEP57L1Q8IYX8 460 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 BSDC1Q9NW68 430 aaPredicted RBP21.56■■□□□ 1.04
CDH5-205ENST00000565334 ZSWIM5Q9P217 1185 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 MYO5AQ9Y4I1 1855 aaKnown RBP21.56■■□□□ 1.04
CDH5-205ENST00000565334 KIF28PB7ZC32 967 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 PPP6R2O75170 966 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 CDC27P30260 824 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 SLC39A14Q15043 492 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 LCORLQ8N3X6 602 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 KIAA1524Q8TCG1 905 aa21.56■■□□□ 1.04
CDH5-205ENST00000565334 SNAP23O00161 211 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 CMA1P23946 247 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 CTDSPL2Q05D32 466 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 SSRP1Q08945 709 aaKnown RBP21.55■■□□□ 1.04
CDH5-205ENST00000565334 SPC24Q8NBT2 197 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 SDF4Q9BRK5 362 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 MYH14Q7Z406 1995 aaKnown RBP21.55■■□□□ 1.04
CDH5-205ENST00000565334 ERICH2A1L162 156 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 IFNAR1P17181 557 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 SLC10A5Q5PT55 438 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 VPS37DQ86XT2 251 aa21.55■■□□□ 1.04
CDH5-205ENST00000565334 UQCRHLA0A096LP55 91 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 BECN2A8MW95 431 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
CDH5-205ENST00000565334 UQCRHP07919 91 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 U2AF2P26368 475 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDH5-205ENST00000565334 C11orf57Q6ZUT1 292 aaPredicted RBP21.54■■□□□ 1.04
CDH5-205ENST00000565334 MRFAP1L1Q96HT8 127 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 PRIMPOLQ96LW4 560 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 TIGD1Q96MW7 591 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 KCNF1Q9H3M0 494 aa21.54■■□□□ 1.04
CDH5-205ENST00000565334 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
CDH5-205ENST00000565334 FAM13BQ9NYF5 915 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms