RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 WDR18Q9BV38 432 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 EMILIN2Q9BXX0 1053 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 SEMA6BQ9H3T3 888 aa7.32□□□□□ -1.24
PALB2-203ENST00000565038 GAS2O43903 313 aaKnown RBP7.31□□□□□ -1.24
PALB2-203ENST00000565038 AOC2O75106 756 aa7.31□□□□□ -1.24
PALB2-203ENST00000565038 ADH5P11766 374 aa7.31□□□□□ -1.24
PALB2-203ENST00000565038 SOX4Q06945 474 aaPredicted RBP7.31□□□□□ -1.24
PALB2-203ENST00000565038 CRELD1Q96HD1 420 aa7.31□□□□□ -1.24
PALB2-203ENST00000565038 AP4E1Q9UPM8 1137 aa7.31□□□□□ -1.24
PALB2-203ENST00000565038 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
PALB2-203ENST00000565038 SAMM50Q9Y512 469 aa7.31□□□□□ -1.24
PALB2-203ENST00000565038 DYRK3O43781 588 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 BMP3P12645 472 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 ZNF252P-AS1Q0IIN9 211 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 SGO2Q562F6 1265 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 PRR23CQ6ZRP0 262 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 DYMQ7RTS9 669 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 C2CD4AQ8NCU7 369 aaPredicted RBP7.3□□□□□ -1.24
PALB2-203ENST00000565038 MYRFLQ96LU7 910 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 PODXL2Q9NZ53 605 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 USP31Q70CQ4 1352 aa7.3□□□□□ -1.24
PALB2-203ENST00000565038 RBM47A0AV96 593 aaKnown RBP7.29□□□□□ -1.24
PALB2-203ENST00000565038 DHX15O43143 795 aaKnown RBP7.29□□□□□ -1.24
PALB2-203ENST00000565038 MRPL58Q14197 206 aaKnown RBP7.29□□□□□ -1.24
PALB2-203ENST00000565038 UVSSAQ2YD98 709 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 TTBK2Q6IQ55 1244 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 LLGL2Q6P1M3 1020 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.29□□□□□ -1.24
PALB2-203ENST00000565038 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 ACSBG1Q96GR2 724 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 KCNF1Q9H3M0 494 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 KRT82Q9NSB4 513 aa7.29□□□□□ -1.24
PALB2-203ENST00000565038 F6X3S4 739 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 K7ELQ4 463 aaPredicted RBP7.28□□□□□ -1.24
PALB2-203ENST00000565038 H2AFB1P0C5Y9 115 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 H2AFB2P0C5Z0 115 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 SLFN14P0C7P3 912 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 USP11P51784 963 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 CDPF1Q6NVV7 123 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 FAM20CQ8IXL6 584 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 STOML1Q9UBI4 398 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 RAXQ9Y2V3 346 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 ACTL7BQ9Y614 415 aa7.28□□□□□ -1.24
PALB2-203ENST00000565038 MAP4P27816 1152 aaKnown RBP7.27□□□□□ -1.25
PALB2-203ENST00000565038 RXRBP28702 533 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 ITGAEP38570 1179 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
PALB2-203ENST00000565038 LRRC14Q15048 493 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 KIF4BQ2VIQ3 1234 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 FBLIM1Q8WUP2 373 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 BCL11AQ9H165 835 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 FAM105AQ9NUU6 356 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
PALB2-203ENST00000565038 HMX2A2RU54 273 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 TMPRSS2O15393 492 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 RAB6AP20340 208 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 ASPAP45381 313 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 LIG3P49916 1009 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 ID3Q02535 119 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 PTPN11Q06124 597 aaPredicted RBP7.26□□□□□ -1.25
PALB2-203ENST00000565038 BEND4Q6ZU67 534 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 TRIM42Q8IWZ5 723 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 TLR6Q9Y2C9 796 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 PCDHB5Q9Y5E4 795 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 PCDHGC5Q9Y5F6 944 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 CSADQ9Y600 493 aa7.26□□□□□ -1.25
PALB2-203ENST00000565038 ADAM23O75077 832 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 TRIM37O94972 964 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 ITGB7P26010 798 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 NOC4LQ9BVI4 516 aaKnown RBP7.25□□□□□ -1.25
PALB2-203ENST00000565038 C7orf69Q9H7B7 122 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 CACNA2D2Q9NY47 1150 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 CRIM1Q9NZV1 1036 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 HIF3AQ9Y2N7 669 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 SYNGAP1Q96PV0 1343 aa7.25□□□□□ -1.25
PALB2-203ENST00000565038 DCDC2CA8MYV0 355 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 TFE3P19532 575 aaPredicted RBP7.24□□□□□ -1.25
PALB2-203ENST00000565038 LMNB1P20700 586 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
PALB2-203ENST00000565038 SEPT6Q14141 434 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 ZC3H12AQ5D1E8 599 aaKnown RBP7.24□□□□□ -1.25
PALB2-203ENST00000565038 PRSS36Q5K4E3 855 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 LDLRAD1Q5T700 205 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 AGMOQ6ZNB7 445 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 CLEC10AQ8IUN9 316 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 FANCD2OSQ96PS1 177 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 FAM83CQ9BQN1 747 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 DISC1Q9NRI5 854 aa7.24□□□□□ -1.25
PALB2-203ENST00000565038 FAM95CA0A1B0GW59 222 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 NFICP08651 508 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 FSTP19883 344 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 NFKBIBQ15653 356 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 TSNAXIP1Q2TAA8 658 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.23□□□□□ -1.25
PALB2-203ENST00000565038 TMEM87AQ8NBN3 555 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 GAL3ST3Q96A11 431 aa7.23□□□□□ -1.25
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