RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TMEM39AQ9NV64 488 aa8.27□□□□□ -1.09
CHD9-212ENST00000564641 TREHO43280 583 aa8.26□□□□□ -1.09
CHD9-212ENST00000564641 NFICP08651 508 aa8.26□□□□□ -1.09
CHD9-212ENST00000564641 RAB6AP20340 208 aa8.26□□□□□ -1.09
CHD9-212ENST00000564641 WDR18Q9BV38 432 aa8.26□□□□□ -1.09
CHD9-212ENST00000564641 ECEL1O95672 775 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 FCGRTP55899 365 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 KCNA1Q09470 495 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 FAAP100Q0VG06 881 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 ENOX2Q16206 610 aaKnown RBP8.25□□□□□ -1.09
CHD9-212ENST00000564641 ZSCAN29Q8IWY8 852 aaPredicted RBP8.25□□□□□ -1.09
CHD9-212ENST00000564641 FBF1Q8TES7 1133 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 BCO2Q9BYV7 579 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 SRCIN1Q9C0H9 1055 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 ATXN3LQ9H3M9 355 aa8.25□□□□□ -1.09
CHD9-212ENST00000564641 ANGEL1Q9UNK9 670 aaKnown RBP8.25□□□□□ -1.09
CHD9-212ENST00000564641 CYP26A1O43174 497 aa8.24□□□□□ -1.09
CHD9-212ENST00000564641 GSTP1P09211 210 aaKnown RBP8.24□□□□□ -1.09
CHD9-212ENST00000564641 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
CHD9-212ENST00000564641 GPN3Q9UHW5 284 aaPredicted RBP8.24□□□□□ -1.09
CHD9-212ENST00000564641 OAS3Q9Y6K5 1087 aaKnown RBP8.24□□□□□ -1.09
CHD9-212ENST00000564641 PNMA6FA0A0J9YX94 578 aa8.23□□□□□ -1.09
CHD9-212ENST00000564641 PATL2C9JE40 543 aaKnown RBP8.23□□□□□ -1.09
CHD9-212ENST00000564641 PRNPP04156 253 aa8.23□□□□□ -1.09
CHD9-212ENST00000564641 HOXA10P31260 410 aaPredicted RBP8.23□□□□□ -1.09
CHD9-212ENST00000564641 ADMP35318 185 aa8.23□□□□□ -1.09
CHD9-212ENST00000564641 BSDC1Q9NW68 430 aaPredicted RBP8.23□□□□□ -1.09
CHD9-212ENST00000564641 GIPC1O14908 333 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 PAX4O43316 350 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 ID3Q02535 119 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 KIF4BQ2VIQ3 1234 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHD9-212ENST00000564641 GATA6Q92908 595 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 CCDC86Q9H6F5 360 aaKnown RBP8.22□□□□□ -1.09
CHD9-212ENST00000564641 PIDD1Q9HB75 910 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 PPP1R9AQ9ULJ8 1098 aa8.22□□□□□ -1.09
CHD9-212ENST00000564641 TMPRSS2O15393 492 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 ADAMTS4O75173 837 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 ZNF157P51786 506 aaPredicted RBP8.21□□□□□ -1.1
CHD9-212ENST00000564641 SEZ6L2Q6UXD5 910 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 VSIG10LQ86VR7 867 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 AKAP2Q9Y2D5 859 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 DAGLAQ9Y4D2 1042 aa8.21□□□□□ -1.1
CHD9-212ENST00000564641 FAM170BA6NMN3 283 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 LIG1P18858 919 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 GSTT1P30711 240 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 CYP27C1Q4G0S4 372 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 ALG1LQ6GMV1 187 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 OGFOD3Q6PK18 319 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 NXPE4Q6UWF7 544 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 PI16Q6UXB8 463 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 SULF2Q8IWU5 870 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 CEP44Q9C0F1 390 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
CHD9-212ENST00000564641 ZNF862O60290 1169 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 NME2P22392 152 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 ARNTP27540 789 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 PDZD3Q86UT5 571 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 ASB16Q96NS5 453 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 FANCD2OSQ96PS1 177 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 PPM1HQ9ULR3 514 aa8.19□□□□□ -1.1
CHD9-212ENST00000564641 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
CHD9-212ENST00000564641 FMR1Q06787 632 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD9-212ENST00000564641 ZNF765Q7L2R6 523 aa8.18□□□□□ -1.1
CHD9-212ENST00000564641 SHISA5Q8N114 240 aa8.18□□□□□ -1.1
CHD9-212ENST00000564641 KCNB2Q92953 911 aa8.18□□□□□ -1.1
CHD9-212ENST00000564641 WDR89Q96FK6 387 aaPredicted RBP8.18□□□□□ -1.1
CHD9-212ENST00000564641 ZC3H12CQ9C0D7 883 aaKnown RBP8.18□□□□□ -1.1
CHD9-212ENST00000564641 IVNS1ABPQ9Y6Y0 642 aa8.18□□□□□ -1.1
CHD9-212ENST00000564641 TAL1P17542 331 aaPredicted RBP8.17□□□□□ -1.1
CHD9-212ENST00000564641 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
CHD9-212ENST00000564641 SMYD4Q8IYR2 804 aaPredicted RBP8.17□□□□□ -1.1
CHD9-212ENST00000564641 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
CHD9-212ENST00000564641 SPG7Q9UQ90 795 aa8.17□□□□□ -1.1
CHD9-212ENST00000564641 PCDHGC5Q9Y5F6 944 aa8.17□□□□□ -1.1
CHD9-212ENST00000564641 MAPK8P45983 427 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 AGBL5Q8NDL9 886 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 C3orf58Q8NDZ4 430 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
CHD9-212ENST00000564641 KRTAP9-2Q9BYQ4 174 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 LRRC4CQ9HCJ2 640 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 PCOLCE2Q9UKZ9 415 aa8.16□□□□□ -1.1
CHD9-212ENST00000564641 DYNC1LI2O43237 492 aaPredicted RBP8.15□□□□□ -1.1
CHD9-212ENST00000564641 TXKP42681 527 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 ERVK-24P63145 666 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 TP53INP2Q8IXH6 220 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 FRMD6Q96NE9 622 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 TRAIPQ9BWF2 469 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.1
CHD9-212ENST00000564641 FGD1P98174 961 aa8.14□□□□□ -1.11
CHD9-212ENST00000564641 ZNF252P-AS1Q0IIN9 211 aa8.14□□□□□ -1.11
CHD9-212ENST00000564641 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
CHD9-212ENST00000564641 MAP1SQ66K74 1059 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms