RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 SYNGAP1Q96PV0 1343 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 F8W735 103 aaPredicted RBP9.16□□□□□ -0.94
DENND4A-204ENST00000562028 TFE3P19532 575 aaPredicted RBP9.16□□□□□ -0.94
DENND4A-204ENST00000562028 LMNB1P20700 586 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 LMNB2Q03252 620 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 PDE3AQ14432 1141 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 C9orf131Q5VYM1 1079 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 MAP1SQ66K74 1059 aaPredicted RBP9.16□□□□□ -0.94
DENND4A-204ENST00000562028 USP48Q86UV5 1035 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 RHOVQ96L33 236 aa9.16□□□□□ -0.94
DENND4A-204ENST00000562028 ZC3H12CQ9C0D7 883 aaKnown RBP9.16□□□□□ -0.94
DENND4A-204ENST00000562028 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
DENND4A-204ENST00000562028 KRBA1A5PL33 1030 aa9.15□□□□□ -0.94
DENND4A-204ENST00000562028 CCDC84Q86UT8 332 aaPredicted RBP9.15□□□□□ -0.94
DENND4A-204ENST00000562028 TRIM42Q8IWZ5 723 aa9.15□□□□□ -0.94
DENND4A-204ENST00000562028 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
DENND4A-204ENST00000562028 SUGCTQ9HAC7 445 aa9.15□□□□□ -0.94
DENND4A-204ENST00000562028 MINDY4BA8MYZ0 360 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 F6X3S4 739 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 PF4P02776 101 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 GSK3AP49840 483 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 RASSF7Q02833 373 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 CAMK2GQ13555 558 aaPredicted RBP9.14□□□□□ -0.95
DENND4A-204ENST00000562028 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 NUTM2GQ5VZR2 741 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 TGIF2Q9GZN2 237 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 MIR1-1HGQ9H1L0 117 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 CYP4F12Q9HCS2 524 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 KCNQ5Q9NR82 932 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
DENND4A-204ENST00000562028 ZNF862O60290 1169 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 EIF4A3P38919 411 aaKnown RBP9.13□□□□□ -0.95
DENND4A-204ENST00000562028 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 KIF4BQ2VIQ3 1234 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 ZNF654Q8IZM8 581 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 SMG8Q8ND04 991 aaKnown RBP9.13□□□□□ -0.95
DENND4A-204ENST00000562028 GPBAR1Q8TDU6 330 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 GAL3ST3Q96A11 431 aa9.13□□□□□ -0.95
DENND4A-204ENST00000562028 AOC2O75106 756 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 SLFN14P0C7P3 912 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 LIG1P18858 919 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 ERCC5P28715 1186 aaPredicted RBP9.12□□□□□ -0.95
DENND4A-204ENST00000562028 RACK1P63244 317 aaKnown RBP9.12□□□□□ -0.95
DENND4A-204ENST00000562028 RAD51AP2Q09MP3 1159 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 ANKRD34AQ69YU3 496 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 Q6ZS46 218 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 AGGF1Q8N302 714 aaeCLIP9.12□□□□□ -0.95
DENND4A-204ENST00000562028 WFDC12Q8WWY7 111 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 WDR89Q96FK6 387 aaPredicted RBP9.12□□□□□ -0.95
DENND4A-204ENST00000562028 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 RAD18Q9NS91 495 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 PCDHGB7Q9Y5F8 929 aa9.12□□□□□ -0.95
DENND4A-204ENST00000562028 ALX3O95076 343 aa9.11□□□□□ -0.95
DENND4A-204ENST00000562028 NOS3P29474 1203 aa9.11□□□□□ -0.95
DENND4A-204ENST00000562028 DIEXFQ68CQ4 756 aaKnown RBP9.11□□□□□ -0.95
DENND4A-204ENST00000562028 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
DENND4A-204ENST00000562028 ACSBG1Q96GR2 724 aa9.11□□□□□ -0.95
DENND4A-204ENST00000562028 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
DENND4A-204ENST00000562028 GARTP22102 1010 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 CHRNA4P43681 627 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
DENND4A-204ENST00000562028 PTPN11Q06124 597 aaPredicted RBP9.1□□□□□ -0.95
DENND4A-204ENST00000562028 SEPT6Q14141 434 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 FDX2Q6P4F2 183 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 TXNRD3Q86VQ6 643 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 CEP41Q9BYV8 373 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 ADAMTS1Q9UHI8 967 aa9.1□□□□□ -0.95
DENND4A-204ENST00000562028 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
DENND4A-204ENST00000562028 C1QTNF9BB2RNN3 333 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 GREM1O60565 184 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 TIAF1O95411 115 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 FAM160A1Q05DH4 1040 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 SNAP47Q5SQN1 464 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 GOLM1Q8NBJ4 401 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 ZNF296Q8WUU4 475 aaPredicted RBP9.09□□□□□ -0.95
DENND4A-204ENST00000562028 GATAD2BQ8WXI9 593 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 PCDHA4Q9UN74 947 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 PCDHGC5Q9Y5F6 944 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 ROBO2Q9HCK4 1378 aa9.09□□□□□ -0.95
DENND4A-204ENST00000562028 FAM221AA4D161 298 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 GDF11O95390 407 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 SOX4Q06945 474 aaPredicted RBP9.08□□□□□ -0.96
DENND4A-204ENST00000562028 ZC3H12AQ5D1E8 599 aaKnown RBP9.08□□□□□ -0.96
DENND4A-204ENST00000562028 KIAA0825Q8IV33 1275 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 C12orf50Q8NA57 414 aaPredicted RBP9.08□□□□□ -0.96
DENND4A-204ENST00000562028 JARID2Q92833 1246 aaPredicted RBP9.08□□□□□ -0.96
DENND4A-204ENST00000562028 SPON2Q9BUD6 331 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 CCSER2Q9H7U1 834 aa9.08□□□□□ -0.96
DENND4A-204ENST00000562028 F13A1P00488 732 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 ADH5P11766 374 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 GLB1P16278 677 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 ID3Q02535 119 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 AKAP4Q5JQC9 854 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 BNC2Q6ZN30 1099 aaPredicted RBP9.07□□□□□ -0.96
DENND4A-204ENST00000562028 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
DENND4A-204ENST00000562028 DZIP1LQ8IYY4 767 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms