RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.31
IFT140-205ENST00000561954 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.31
IFT140-205ENST00000561954 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
IFT140-205ENST00000561954 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
IFT140-205ENST00000561954 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
IFT140-205ENST00000561954 GPR75-ASB3A0A0A6YYF3 556 aa16.95■□□□□ 0.3
IFT140-205ENST00000561954 ADM5C9JUS6 153 aa16.95■□□□□ 0.3
IFT140-205ENST00000561954 ITGBL1O95965 494 aaPredicted RBP16.95■□□□□ 0.3
IFT140-205ENST00000561954 MAGEB6Q8N7X4 407 aa16.95■□□□□ 0.3
IFT140-205ENST00000561954 OSBPL3Q9H4L5 887 aa16.95■□□□□ 0.3
IFT140-205ENST00000561954 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 PDE6AP16499 860 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 CYP7A1P22680 504 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 NF2P35240 595 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 SLC9C2Q5TAH2 1124 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
IFT140-205ENST00000561954 ZFYP08048 801 aaPredicted RBP16.93■□□□□ 0.3
IFT140-205ENST00000561954 APLP1P51693 650 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 CDC42EP5Q6NZY7 148 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 FAM83AQ86UY5 434 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 EDC3Q96F86 508 aaKnown RBP16.93■□□□□ 0.3
IFT140-205ENST00000561954 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 DEFB129Q9H1M3 183 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 USP40Q9NVE5 1235 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
IFT140-205ENST00000561954 TRAF5O00463 557 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 TICAM2Q86XR7 235 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
IFT140-205ENST00000561954 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 HSPA6P17066 643 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 ADD2P35612 726 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 PPP4CP60510 307 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 RASA3Q14644 834 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 UBE3CQ15386 1083 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 IDI2Q9BXS1 227 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 AATFQ9NY61 560 aaKnown RBP eCLIP16.91■□□□□ 0.3
IFT140-205ENST00000561954 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
IFT140-205ENST00000561954 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
IFT140-205ENST00000561954 PAPPA2Q9BXP8 1791 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 TMEM88BA6NKF7 163 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 ENTPD3O75355 529 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
IFT140-205ENST00000561954 CELF2O95319 508 aaKnown RBP16.9■□□□□ 0.3
IFT140-205ENST00000561954 CACNB3P54284 484 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 FKBP1BP68106 108 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 TEX11Q8IYF3 940 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
IFT140-205ENST00000561954 CNTNAP1P78357 1384 aa16.89■□□□□ 0.3
IFT140-205ENST00000561954 MAGEB6P1A0A0J9YX57 407 aa16.89■□□□□ 0.29
IFT140-205ENST00000561954 TCRBV5S4A2TA0A5A2 114 aa16.89■□□□□ 0.29
IFT140-205ENST00000561954 RHBDL3P58872 404 aa16.89■□□□□ 0.29
IFT140-205ENST00000561954 MIGA1Q8NAN2 632 aa16.89■□□□□ 0.29
IFT140-205ENST00000561954 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
IFT140-205ENST00000561954 TRPM7Q96QT4 1865 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 MYH7P12883 1935 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
IFT140-205ENST00000561954 PDE4AP27815 886 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 RGS3P49796 1198 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 APPBP2Q92624 585 aa16.88■□□□□ 0.29
IFT140-205ENST00000561954 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
IFT140-205ENST00000561954 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
IFT140-205ENST00000561954 NFIAQ12857 509 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 PICALMQ13492 652 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 C2orf69Q8N8R5 385 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
IFT140-205ENST00000561954 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 CRNKL1Q9BZJ0 848 aaKnown RBP16.87■□□□□ 0.29
IFT140-205ENST00000561954 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 GBA2Q9HCG7 927 aaPredicted RBP16.87■□□□□ 0.29
IFT140-205ENST00000561954 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
IFT140-205ENST00000561954 ATRNL1Q5VV63 1379 aa16.87■□□□□ 0.29
IFT140-205ENST00000561954 SSC5DA1L4H1 1573 aa16.86■□□□□ 0.29
IFT140-205ENST00000561954 PPP1R12BO60237 982 aaPredicted RBP16.86■□□□□ 0.29
IFT140-205ENST00000561954 TTC22Q5TAA0 569 aa16.86■□□□□ 0.29
IFT140-205ENST00000561954 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
IFT140-205ENST00000561954 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
IFT140-205ENST00000561954 FAM198AQ9UFP1 575 aa16.86■□□□□ 0.29
IFT140-205ENST00000561954 ABT1Q9ULW3 272 aaKnown RBP16.86■□□□□ 0.29
IFT140-205ENST00000561954 FLT1P17948 1338 aa16.86■□□□□ 0.29
IFT140-205ENST00000561954 HIP1O00291 1037 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 MBD4O95243 580 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 USP5P45974 858 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 TCP10Q12799 353 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
IFT140-205ENST00000561954 RILPL2Q969X0 211 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
IFT140-205ENST00000561954 OSBPL5Q9H0X9 879 aaPredicted RBP16.85■□□□□ 0.29
IFT140-205ENST00000561954 FOCADQ5VW36 1801 aa16.84■□□□□ 0.29
IFT140-205ENST00000561954 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms