RNA–Protein interactions for RNA: ENST00000561441.5

AP4E1-207, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 2

Gene AP4E1, Length 1,603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-207ENST00000561441 LIMCH1Q9UPQ0 1083 aa31.75■■■□□ 2.67
AP4E1-207ENST00000561441 DHX32Q7L7V1 743 aaKnown RBP31.75■■■□□ 2.67
AP4E1-207ENST00000561441 KCNQ5Q9NR82 932 aa31.75■■■□□ 2.67
AP4E1-207ENST00000561441 FOXD4L1Q9NU39 408 aa31.75■■■□□ 2.67
AP4E1-207ENST00000561441 PPIP5K2O43314 1243 aa31.74■■■□□ 2.67
AP4E1-207ENST00000561441 PPP4CP60510 307 aa31.74■■■□□ 2.67
AP4E1-207ENST00000561441 KLHL34Q8N239 644 aa31.74■■■□□ 2.67
AP4E1-207ENST00000561441 FAM163AQ96GL9 167 aaPredicted RBP31.74■■■□□ 2.67
AP4E1-207ENST00000561441 CRNKL1Q9BZJ0 848 aaKnown RBP31.74■■■□□ 2.67
AP4E1-207ENST00000561441 CUL4AQ13619 759 aa31.73■■■□□ 2.67
AP4E1-207ENST00000561441 GIMAP6Q6P9H5 292 aa31.73■■■□□ 2.67
AP4E1-207ENST00000561441 TBC1D10CQ8IV04 446 aa31.73■■■□□ 2.67
AP4E1-207ENST00000561441 LARP6Q9BRS8 491 aaKnown RBP31.73■■■□□ 2.67
AP4E1-207ENST00000561441 BAG3O95817 575 aa31.72■■■□□ 2.67
AP4E1-207ENST00000561441 EXOSC10Q01780 885 aaKnown RBP31.72■■■□□ 2.67
AP4E1-207ENST00000561441 ANKRD1Q15327 319 aa31.72■■■□□ 2.67
AP4E1-207ENST00000561441 SLF2Q8IX21 1173 aa31.72■■■□□ 2.67
AP4E1-207ENST00000561441 MXD3Q9BW11 206 aa31.72■■■□□ 2.67
AP4E1-207ENST00000561441 DDIT3P35638 169 aa31.71■■■□□ 2.67
AP4E1-207ENST00000561441 TOB2Q14106 344 aaPredicted RBP31.71■■■□□ 2.67
AP4E1-207ENST00000561441 STRIP1Q5VSL9 837 aa31.71■■■□□ 2.67
AP4E1-207ENST00000561441 NOL10Q9BSC4 688 aaKnown RBP31.71■■■□□ 2.67
AP4E1-207ENST00000561441 GAKO14976 1311 aa31.7■■■□□ 2.67
AP4E1-207ENST00000561441 GPR75-ASB3A0A0A6YYF3 556 aa31.7■■■□□ 2.66
AP4E1-207ENST00000561441 FKBP1AP62942 108 aaKnown RBP31.7■■■□□ 2.66
AP4E1-207ENST00000561441 NCOA7Q8NI08 942 aa31.7■■■□□ 2.66
AP4E1-207ENST00000561441 ATP8A2Q9NTI2 1148 aa31.7■■■□□ 2.66
AP4E1-207ENST00000561441 MB21D2Q8IYB1 491 aaPredicted RBP31.69■■■□□ 2.66
AP4E1-207ENST00000561441 ZSCAN31Q96LW9 406 aaPredicted RBP31.69■■■□□ 2.66
AP4E1-207ENST00000561441 CTDSPL2Q05D32 466 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 DACT2Q5SW24 774 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 Q6ZUG5 572 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 CERS3Q8IU89 383 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 SH3RF3Q8TEJ3 882 aaPredicted RBP31.68■■■□□ 2.66
AP4E1-207ENST00000561441 VPS33BQ9H267 617 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 DCP1AQ9NPI6 582 aaPredicted RBP31.68■■■□□ 2.66
AP4E1-207ENST00000561441 ZNF277Q9NRM2 450 aaPredicted RBP31.68■■■□□ 2.66
AP4E1-207ENST00000561441 TPCN1Q9ULQ1 816 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 LAMA4Q16363 1823 aa31.68■■■□□ 2.66
AP4E1-207ENST00000561441 USP17L3A6NCW0 530 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 USP17L4A6NCW7 530 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 BTDP43251 543 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 USP17L1Q7RTZ2 530 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 TTF2Q9UNY4 1162 aaKnown RBP31.67■■■□□ 2.66
AP4E1-207ENST00000561441 F8W031 263 aaPredicted RBP31.67■■■□□ 2.66
AP4E1-207ENST00000561441 PPARAQ07869 468 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 TRDNQ13061 729 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 ILDR2Q71H61 639 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 RALYLQ86SE5 291 aaKnown RBP31.67■■■□□ 2.66
AP4E1-207ENST00000561441 SPON1Q9HCB6 807 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 ANAPC4Q9UJX5 808 aa31.67■■■□□ 2.66
AP4E1-207ENST00000561441 LARGE1O95461 756 aa31.66■■■□□ 2.66
AP4E1-207ENST00000561441 INTS4Q96HW7 963 aaKnown RBP31.66■■■□□ 2.66
AP4E1-207ENST00000561441 LRRC2Q9BYS8 371 aa31.66■■■□□ 2.66
AP4E1-207ENST00000561441 BRCA1P38398 1863 aaKnown RBP31.65■■■□□ 2.66
AP4E1-207ENST00000561441 YDJCA8MPS7 323 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 AKNAD1Q5T1N1 836 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 CTR9Q6PD62 1173 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 AGXT2Q9BYV1 514 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 SH2B1Q9NRF2 756 aaPredicted RBP31.65■■■□□ 2.66
AP4E1-207ENST00000561441 DAGLAQ9Y4D2 1042 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 TACC3Q9Y6A5 838 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 TIAM2Q8IVF5 1701 aa31.65■■■□□ 2.66
AP4E1-207ENST00000561441 MINDY4BA8MYZ0 360 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 MCM5P33992 734 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 CHST3Q7LGC8 479 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 LARGE2Q8N3Y3 721 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 STAG1Q8WVM7 1258 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 CHMP5Q9NZZ3 219 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 NEDD4P46934 1319 aa31.64■■■□□ 2.66
AP4E1-207ENST00000561441 PLCG2P16885 1265 aa31.64■■■□□ 2.65
AP4E1-207ENST00000561441 ME3Q16798 604 aa31.64■■■□□ 2.65
AP4E1-207ENST00000561441 FBXL16Q8N461 479 aa31.64■■■□□ 2.65
AP4E1-207ENST00000561441 INCENPQ9NQS7 918 aa31.64■■■□□ 2.65
AP4E1-207ENST00000561441 MKRN1Q9UHC7 482 aaKnown RBP31.64■■■□□ 2.65
AP4E1-207ENST00000561441 MYH2Q9UKX2 1941 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 USP17L12C9JPN9 530 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 USP17L21D6R901 530 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 ANTXR2P58335 489 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 FGD1P98174 961 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 MFSD6Q6ZSS7 791 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 CWC22Q9HCG8 908 aaKnown RBP31.63■■■□□ 2.65
AP4E1-207ENST00000561441 WDR19Q8NEZ3 1342 aa31.63■■■□□ 2.65
AP4E1-207ENST00000561441 PRC1O43663 620 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 USP5P45974 858 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 RHBDL3P58872 404 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 NLGN2Q8NFZ4 835 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 NKX2-3Q8TAU0 364 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 BRF1Q92994 677 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 CNNM2Q9H8M5 875 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 CIZ1Q9ULV3 898 aaPredicted RBP31.62■■■□□ 2.65
AP4E1-207ENST00000561441 BCS1LQ9Y276 419 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 SCN9AQ15858 1988 aa31.62■■■□□ 2.65
AP4E1-207ENST00000561441 SBK1Q52WX2 424 aa31.61■■■□□ 2.65
AP4E1-207ENST00000561441 HHIPL2Q6UWX4 724 aa31.61■■■□□ 2.65
AP4E1-207ENST00000561441 CYP2D7A0A087X1C5 515 aa31.6■■■□□ 2.65
AP4E1-207ENST00000561441 B4E1Z4 1266 aa31.6■■■□□ 2.65
AP4E1-207ENST00000561441 IARSP41252 1262 aaKnown RBP31.6■■■□□ 2.65
AP4E1-207ENST00000561441 SCNN1DP51172 638 aa31.6■■■□□ 2.65
AP4E1-207ENST00000561441 RNF41Q9H4P4 317 aaPredicted RBP31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms