RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 STOML1Q9UBI4 398 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 AP4E1Q9UPM8 1137 aa6.01□□□□□ -1.45
HERC1-215ENST00000561436 UNCXA6NJT0 531 aa6□□□□□ -1.45
HERC1-215ENST00000561436 DHX15O43143 795 aaKnown RBP6□□□□□ -1.45
HERC1-215ENST00000561436 CYP11A1P05108 521 aa6□□□□□ -1.45
HERC1-215ENST00000561436 CELA3AP09093 270 aa6□□□□□ -1.45
HERC1-215ENST00000561436 ADH5P11766 374 aa6□□□□□ -1.45
HERC1-215ENST00000561436 RAB6AP20340 208 aa6□□□□□ -1.45
HERC1-215ENST00000561436 RXRBP28702 533 aa6□□□□□ -1.45
HERC1-215ENST00000561436 PTPN12Q05209 780 aaKnown RBP6□□□□□ -1.45
HERC1-215ENST00000561436 EXOSC6Q5RKV6 272 aaKnown RBP6□□□□□ -1.45
HERC1-215ENST00000561436 PPP1R3FQ6ZSY5 799 aaPredicted RBP6□□□□□ -1.45
HERC1-215ENST00000561436 BEND4Q6ZU67 534 aa6□□□□□ -1.45
HERC1-215ENST00000561436 SMG8Q8ND04 991 aaKnown RBP6□□□□□ -1.45
HERC1-215ENST00000561436 GRIN3AQ8TCU5 1115 aa6□□□□□ -1.45
HERC1-215ENST00000561436 KCNB2Q92953 911 aa6□□□□□ -1.45
HERC1-215ENST00000561436 WDR18Q9BV38 432 aa6□□□□□ -1.45
HERC1-215ENST00000561436 RAD18Q9NS91 495 aa6□□□□□ -1.45
HERC1-215ENST00000561436 VTI1BQ9UEU0 232 aa6□□□□□ -1.45
HERC1-215ENST00000561436 PARP2Q9UGN5 583 aa6□□□□□ -1.45
HERC1-215ENST00000561436 PPP1R9AQ9ULJ8 1098 aa6□□□□□ -1.45
HERC1-215ENST00000561436 ACTL7BQ9Y614 415 aa6□□□□□ -1.45
HERC1-215ENST00000561436 ERCC6Q03468 1493 aa6□□□□□ -1.45
HERC1-215ENST00000561436 MEGF11A6BM72 1044 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 GIPC1O14908 333 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 ZNF862O60290 1169 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 SORBS3O60504 671 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 MAP4P27816 1152 aaKnown RBP5.99□□□□□ -1.45
HERC1-215ENST00000561436 GNA15P30679 374 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 SOX4Q06945 474 aaPredicted RBP5.99□□□□□ -1.45
HERC1-215ENST00000561436 DYMQ7RTS9 669 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 SULF2Q8IWU5 870 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 CBX8Q9HC52 389 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 CYP4F12Q9HCS2 524 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 FAM105AQ9NUU6 356 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
HERC1-215ENST00000561436 LOC100996750A0A140TA64 210 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 SCO2A0A1W2PP80 73 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 ENC1O14682 589 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 AOC2O75106 756 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 GSTP1P09211 210 aaKnown RBP5.98□□□□□ -1.45
HERC1-215ENST00000561436 GSTT1P30711 240 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 RPS26P11Q5JNZ5 115 aaPredicted RBP5.98□□□□□ -1.45
HERC1-215ENST00000561436 MAP1SQ66K74 1059 aaPredicted RBP5.98□□□□□ -1.45
HERC1-215ENST00000561436 TMC4Q7Z404 712 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 PDZD3Q86UT5 571 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 KRTAP4-6Q9BYQ5 205 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 PPP4R2Q9NY27 417 aa5.98□□□□□ -1.45
HERC1-215ENST00000561436 DYNC1LI2O43237 492 aaPredicted RBP5.97□□□□□ -1.45
HERC1-215ENST00000561436 TGFB1P01137 390 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 EIF4BP23588 611 aaKnown RBP5.97□□□□□ -1.45
HERC1-215ENST00000561436 USP11P51784 963 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 DAB2P98082 770 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 AP3B2Q13367 1082 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 TSNAXIP1Q2TAA8 658 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 MEI1Q5TIA1 1274 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 Q8N3U1 123 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 FBXL6Q8N531 539 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 NECAB3Q96P71 396 aaPredicted RBP5.97□□□□□ -1.45
HERC1-215ENST00000561436 KIAA1522Q9P206 1035 aaPredicted RBP5.97□□□□□ -1.45
HERC1-215ENST00000561436 TTF2Q9UNY4 1162 aaKnown RBP5.97□□□□□ -1.45
HERC1-215ENST00000561436 CSADQ9Y600 493 aa5.97□□□□□ -1.45
HERC1-215ENST00000561436 F6X3S4 739 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 NFICP08651 508 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 TCF3P15923 654 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 PPP2R3AQ06190 1150 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 NFKBIBQ15653 356 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 MAP3K11Q16584 847 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 UVSSAQ2YD98 709 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 DDX54Q8TDD1 881 aaKnown RBP5.96□□□□□ -1.46
HERC1-215ENST00000561436 FAM83CQ9BQN1 747 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 SRCIN1Q9C0H9 1055 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 ATAD2BQ9ULI0 1458 aa5.96□□□□□ -1.46
HERC1-215ENST00000561436 RBAK-RBAKDNI3L0D1 243 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 TMPRSS2O15393 492 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 IGLV1-40P01703 118 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 XRCC5P13010 732 aaKnown RBP5.95□□□□□ -1.46
HERC1-215ENST00000561436 BMP6P22004 513 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 ARNTP27540 789 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 SSTR4P31391 388 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 ADMP35318 185 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 ASPAP45381 313 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 NFIAQ12857 509 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 SHKBP1Q8TBC3 707 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 GPBAR1Q8TDU6 330 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 FAM8A1Q9UBU6 413 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 DAGLAQ9Y4D2 1042 aa5.95□□□□□ -1.46
HERC1-215ENST00000561436 FAM95CA0A1B0GW59 222 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 WDR64B1ANS9 1081 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 SCAMP3O14828 347 aaKnown RBP5.94□□□□□ -1.46
HERC1-215ENST00000561436 MED26O95402 600 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 HCLS1P14317 486 aaPredicted RBP5.94□□□□□ -1.46
HERC1-215ENST00000561436 NME2P22392 152 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 PTPN11Q06124 597 aaPredicted RBP5.94□□□□□ -1.46
HERC1-215ENST00000561436 MRPL58Q14197 206 aaKnown RBP5.94□□□□□ -1.46
HERC1-215ENST00000561436 RNF43Q68DV7 783 aa5.94□□□□□ -1.46
HERC1-215ENST00000561436 CLEC10AQ8IUN9 316 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms