RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 MYH15Q9Y2K3 1946 aa19.22■□□□□ 0.67
MEIS3-209ENST00000561040 IRS2Q9Y4H2 1338 aa19.22■□□□□ 0.67
MEIS3-209ENST00000561040 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
MEIS3-209ENST00000561040 DNM1Q05193 864 aaKnown RBP19.22■□□□□ 0.67
MEIS3-209ENST00000561040 SH2B2O14492 632 aaPredicted RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 BBOX1O75936 387 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 CTDNEP1O95476 244 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 PCP11498 1178 aaKnown RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 HOXA10P31260 410 aaPredicted RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 CCT2P78371 535 aaKnown RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 ZNF804AQ7Z570 1209 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 MIGA1Q8NAN2 632 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 BRIP1Q9BX63 1249 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 ANAPC4Q9UJX5 808 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 FIBPO43427 364 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 CDKL5O76039 1030 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 LIFRP42702 1097 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 SART3Q15020 963 aaKnown RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 SGMS1Q86VZ5 419 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 WDR66Q8TBY9 1149 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 DDX11Q96FC9 970 aa19.21■□□□□ 0.67
MEIS3-209ENST00000561040 RIOK1Q9BRS2 568 aaKnown RBP19.21■□□□□ 0.67
MEIS3-209ENST00000561040 B4E1Z4 1266 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 CPLX1O14810 134 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 LETM1O95202 739 aaPredicted RBP19.2■□□□□ 0.66
MEIS3-209ENST00000561040 XRCC6P12956 609 aaKnown RBP eCLIP19.2■□□□□ 0.66
MEIS3-209ENST00000561040 ATP2B4P23634 1241 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 ATL3Q6DD88 541 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 CPLX2Q6PUV4 134 aaKnown RBP19.2■□□□□ 0.66
MEIS3-209ENST00000561040 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 NSUN4Q96CB9 384 aaKnown RBP19.2■□□□□ 0.66
MEIS3-209ENST00000561040 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 GDPD2Q9HCC8 539 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 TFCP2L1Q9NZI6 479 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 TMEM63CQ9P1W3 806 aa19.2■□□□□ 0.66
MEIS3-209ENST00000561040 NEDD4P46934 1319 aa19.19■□□□□ 0.66
MEIS3-209ENST00000561040 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
MEIS3-209ENST00000561040 WTIPA6NIX2 430 aaPredicted RBP19.19■□□□□ 0.66
MEIS3-209ENST00000561040 POLRMTO00411 1230 aaKnown RBP19.19■□□□□ 0.66
MEIS3-209ENST00000561040 KLRK1P26718 216 aa19.19■□□□□ 0.66
MEIS3-209ENST00000561040 CYB5R4Q7L1T6 521 aa19.19■□□□□ 0.66
MEIS3-209ENST00000561040 PROM2Q8N271 834 aa19.19■□□□□ 0.66
MEIS3-209ENST00000561040 NRXN2Q9P2S2 1712 aa19.19■□□□□ 0.66
MEIS3-209ENST00000561040 PRKAB2O43741 272 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 RESTQ13127 1097 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 ADGRA1Q86SQ6 560 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 TMTC2Q8N394 836 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 NCOA5Q9HCD5 579 aaKnown RBP19.18■□□□□ 0.66
MEIS3-209ENST00000561040 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 LRRC37AA6NMS7 1700 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 GADD45BO75293 160 aaPredicted RBP19.18■□□□□ 0.66
MEIS3-209ENST00000561040 PPARAQ07869 468 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 FERMT3Q86UX7 667 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 IGDCC4Q8TDY8 1250 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 HPS5Q9UPZ3 1129 aa19.18■□□□□ 0.66
MEIS3-209ENST00000561040 NT5C2P49902 561 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 MECOMQ03112 1051 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 CTDSPL2Q05D32 466 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 DDR1Q08345 913 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 TMEM67Q5HYA8 995 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 LRSAM1Q6UWE0 723 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 GAS2L3Q86XJ1 694 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 TDRD7Q8NHU6 1098 aaKnown RBP19.17■□□□□ 0.66
MEIS3-209ENST00000561040 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
MEIS3-209ENST00000561040 GPHNQ9NQX3 736 aaPredicted RBP19.17■□□□□ 0.66
MEIS3-209ENST00000561040 NSFL1CQ9UNZ2 370 aaKnown RBP19.17■□□□□ 0.66
MEIS3-209ENST00000561040 LAMB1P07942 1786 aa19.17■□□□□ 0.66
MEIS3-209ENST00000561040 ERICH2A1L162 156 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 APBA3O96018 575 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 RXRBP28702 533 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 METAP2P50579 478 aaKnown RBP eCLIP19.16■□□□□ 0.66
MEIS3-209ENST00000561040 RCAN1P53805 252 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 GSTO1P78417 241 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 CHAF1AQ13111 956 aaPredicted RBP19.16■□□□□ 0.66
MEIS3-209ENST00000561040 CCDC183Q5T5S1 534 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 CERS3Q8IU89 383 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 RBM27Q9P2N5 1060 aaKnown RBP19.16■□□□□ 0.66
MEIS3-209ENST00000561040 ZBTB43O43298 467 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 KDM4AO75164 1064 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 APOA5Q6Q788 366 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 NFXL1Q6ZNB6 911 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 DZIP1Q86YF9 867 aaKnown RBP19.16■□□□□ 0.66
MEIS3-209ENST00000561040 LY9Q9HBG7 655 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 ATP8A2Q9NTI2 1148 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 ZSWIM5Q9P217 1185 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 GGA1Q9UJY5 639 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 NID2Q14112 1375 aa19.16■□□□□ 0.66
MEIS3-209ENST00000561040 CCDC69A6NI79 296 aa19.15■□□□□ 0.66
MEIS3-209ENST00000561040 IFIT3O14879 490 aaKnown RBP19.15■□□□□ 0.66
MEIS3-209ENST00000561040 DTNBO60941 627 aa19.15■□□□□ 0.66
MEIS3-209ENST00000561040 ESR2Q92731 530 aa19.15■□□□□ 0.66
MEIS3-209ENST00000561040 SPATA32Q96LK8 384 aa19.15■□□□□ 0.66
MEIS3-209ENST00000561040 TXNRD3Q86VQ6 643 aa19.14■□□□□ 0.65
MEIS3-209ENST00000561040 ZNF396Q96N95 335 aaPredicted RBP19.14■□□□□ 0.65
MEIS3-209ENST00000561040 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
MEIS3-209ENST00000561040 SLC12A7Q9Y666 1083 aa19.14■□□□□ 0.65
MEIS3-209ENST00000561040 TNS1Q9HBL0 1735 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms