RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 UBN2Q6ZU65 1347 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 ZNF202O95125 648 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 PFKFB1P16118 471 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 APOA5Q6Q788 366 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 ANKRD36CQ5JPF3 1778 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 SKILP12757 684 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 CCZ1BP86790 482 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 CCZ1P86791 482 aaPredicted RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 ISM2Q6H9L7 571 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 ZNF512BQ96KM6 892 aaPredicted RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 BTG4Q9NY30 223 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 NUP98P52948 1817 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 ECM29Q5VYK3 1845 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 TTF1Q15361 905 aaPredicted RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 UBE3CQ15386 1083 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 VPS37DQ86XT2 251 aa11.36□□□□□ -0.59
SNX22-206ENST00000560997 SYTL4Q96C24 671 aaPredicted RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
SNX22-206ENST00000560997 SLC3A2P08195 630 aaKnown RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 ARID4AP29374 1257 aaPredicted RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 RBM6P78332 1123 aaKnown RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 KRT40Q6A162 431 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 EPB41L4AQ9HCS5 686 aaPredicted RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 SMTNL1A8MU46 457 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 PDE8AO60658 829 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 ZNF592Q92610 1267 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
SNX22-206ENST00000560997 SLIT2O94813 1529 aa11.35□□□□□ -0.59
SNX22-206ENST00000560997 CTDSPL2Q05D32 466 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 NAA30Q147X3 362 aaPredicted RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 SLC39A14Q15043 492 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 PPP4R3BQ5MIZ7 849 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 ANKRD7Q92527 254 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 AIDAQ96BJ3 306 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 BCL9O00512 1426 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 CMA1P23946 247 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 ZRSR1Q15695 479 aaKnown RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 FAM217BQ9NTX9 383 aaPredicted RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 FGFR2P21802 821 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
SNX22-206ENST00000560997 NTRK3Q16288 839 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 NFXL1Q6ZNB6 911 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 PDCL2Q8N4E4 241 aa11.34□□□□□ -0.59
SNX22-206ENST00000560997 ZBTB43O43298 467 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 NEMFO60524 1076 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 MBD4O95243 580 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 SMC2O95347 1197 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 NLRP12P59046 1061 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
SNX22-206ENST00000560997 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 CEP135Q66GS9 1140 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 MAGEB6Q8N7X4 407 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 CLIC6Q96NY7 704 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 IFNKQ9P0W0 207 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 GOLGA8AA7E2F4 631 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 NCAPHQ15003 741 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 PTPAQ15257 358 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 LPIN2Q92539 896 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 ARMT1Q9H993 441 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 GNL2Q13823 731 aaKnown RBP11.33□□□□□ -0.6
SNX22-206ENST00000560997 SPATA5Q8NB90 893 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 BPIFA3Q9BQP9 254 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
SNX22-206ENST00000560997 LRP5O75197 1615 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 PRKAB2O43741 272 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 CDKL5O76039 1030 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
SNX22-206ENST00000560997 SYKP43405 635 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 IFNL3Q8IZI9 196 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 STK11IPQ8N1F8 1099 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 MAP3K14Q99558 947 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 SEC31BQ9NQW1 1179 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 CHD4Q14839 1912 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 LMOD1P29536 600 aaPredicted RBP11.32□□□□□ -0.6
SNX22-206ENST00000560997 NYAP1Q6ZVC0 841 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 TMC6Q7Z403 805 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 ZNF34Q8IZ26 560 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 SLC26A6Q9BXS9 759 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 NAPBQ9H115 298 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 HPSEQ9Y251 543 aa11.32□□□□□ -0.6
SNX22-206ENST00000560997 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
SNX22-206ENST00000560997 GUCY1A2P33402 732 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms