RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 CCZ1P86791 482 aaPredicted RBP20.48■□□□□ 0.87
TRPM1-211ENST00000560658 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
TRPM1-211ENST00000560658 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
TRPM1-211ENST00000560658 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
TRPM1-211ENST00000560658 ZBTB43O43298 467 aa20.47■□□□□ 0.87
TRPM1-211ENST00000560658 CUTAO60888 179 aa20.47■□□□□ 0.87
TRPM1-211ENST00000560658 POLR3DP05423 398 aaPredicted RBP20.47■□□□□ 0.87
TRPM1-211ENST00000560658 U2AF2P26368 475 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRPM1-211ENST00000560658 KRT23Q9C075 422 aa20.47■□□□□ 0.87
TRPM1-211ENST00000560658 ARAP2Q8WZ64 1704 aa20.47■□□□□ 0.87
TRPM1-211ENST00000560658 IRS4O14654 1257 aaPredicted RBP20.46■□□□□ 0.87
TRPM1-211ENST00000560658 PFKFB1P16118 471 aa20.46■□□□□ 0.87
TRPM1-211ENST00000560658 GNL2Q13823 731 aaKnown RBP20.46■□□□□ 0.87
TRPM1-211ENST00000560658 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
TRPM1-211ENST00000560658 CCAR2Q8N163 923 aaKnown RBP20.46■□□□□ 0.87
TRPM1-211ENST00000560658 ZMYND15Q9H091 742 aa20.46■□□□□ 0.87
TRPM1-211ENST00000560658 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
TRPM1-211ENST00000560658 XIRP1Q702N8 1843 aaKnown RBP20.46■□□□□ 0.87
TRPM1-211ENST00000560658 PATL2C9JE40 543 aaKnown RBP20.45■□□□□ 0.87
TRPM1-211ENST00000560658 PDE6AP16499 860 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 IARSP41252 1262 aaKnown RBP20.45■□□□□ 0.87
TRPM1-211ENST00000560658 SYKP43405 635 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 MAP3K12Q12852 859 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 KRT40Q6A162 431 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 TMTC2Q8N394 836 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 KIF18AQ8NI77 898 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 PIGBQ92521 554 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 AIDAQ96BJ3 306 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 GREM2Q9H772 168 aa20.45■□□□□ 0.87
TRPM1-211ENST00000560658 NEDD4P46934 1319 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 AKAP11Q9UKA4 1901 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 TIAM2Q8IVF5 1701 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 SLC5A1P13866 664 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 IL6STP40189 918 aaPredicted RBP20.45■□□□□ 0.86
TRPM1-211ENST00000560658 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 FILIP1Q7Z7B0 1213 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 VPS37DQ86XT2 251 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 STRBPQ96SI9 672 aaKnown RBP20.45■□□□□ 0.86
TRPM1-211ENST00000560658 SLAIN2Q9P270 581 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 MORC2Q9Y6X9 1032 aaPredicted RBP20.45■□□□□ 0.86
TRPM1-211ENST00000560658 ZNF532Q9HCE3 1301 aa20.45■□□□□ 0.86
TRPM1-211ENST00000560658 TCRBV5S4A2TA0A5A2 114 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 KIF28PB7ZC32 967 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 FGFR2P21802 821 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 SFPQP23246 707 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRPM1-211ENST00000560658 NCBP1Q09161 790 aaKnown RBP20.44■□□□□ 0.86
TRPM1-211ENST00000560658 PPP2R5BQ15173 497 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 DPCR1Q3MIW9 517 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
TRPM1-211ENST00000560658 RESP18Q5W5W9 173 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 CCDC102BQ68D86 513 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 IGDCC4Q8TDY8 1250 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 BCL11BQ9C0K0 894 aaPredicted RBP20.44■□□□□ 0.86
TRPM1-211ENST00000560658 NBPF3Q9H094 633 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 MYH3P11055 1940 aa20.44■□□□□ 0.86
TRPM1-211ENST00000560658 CCDC196A0A1B0GTZ2 297 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 GOLGA8AA7E2F4 631 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 APPP05067 770 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
TRPM1-211ENST00000560658 SART3Q15020 963 aaKnown RBP20.43■□□□□ 0.86
TRPM1-211ENST00000560658 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRPM1-211ENST00000560658 OTUD7BQ6GQQ9 843 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 NBPF11Q86T75 865 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 TBC1D10CQ8IV04 446 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 NACAP1Q9BZK3 213 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 PIH1D3Q9NQM4 214 aaKnown RBP20.43■□□□□ 0.86
TRPM1-211ENST00000560658 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
TRPM1-211ENST00000560658 BCL9O00512 1426 aa20.43■□□□□ 0.86
TRPM1-211ENST00000560658 IDH1O75874 414 aaKnown RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 PTPAQ15257 358 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 NFXL1Q6ZNB6 911 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 CYB5R4Q7L1T6 521 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 STRN4Q9NRL3 753 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 ASAP1Q9ULH1 1129 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 ZNF330Q9Y3S2 320 aaPredicted RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 SMC2O95347 1197 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 FMNL1O95466 1100 aaPredicted RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 IFNAR1P17181 557 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 MYL5Q02045 173 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 NTRK3Q16288 839 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 TMEM67Q5HYA8 995 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 MAP3K14Q99558 947 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 GTPBP4Q9BZE4 634 aaKnown RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 XPO4Q9C0E2 1151 aaKnown RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 NAPBQ9H115 298 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 RNF41Q9H4P4 317 aaPredicted RBP20.42■□□□□ 0.86
TRPM1-211ENST00000560658 LY9Q9HBG7 655 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 DACH1Q9UI36 760 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 SLC12A7Q9Y666 1083 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 PNPLA7Q6ZV29 1317 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 RTL9Q8NET4 1388 aa20.42■□□□□ 0.86
TRPM1-211ENST00000560658 DISP2A7MBM2 1401 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 NCAPHQ15003 741 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 CT47A1Q5JQC4 288 aaPredicted RBP20.41■□□□□ 0.86
TRPM1-211ENST00000560658 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
TRPM1-211ENST00000560658 ZNF34Q8IZ26 560 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms