RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 HHIPL1Q96JK4 782 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 AOX1Q06278 1338 aa16.97■□□□□ 0.31
PKNOX1-209ENST00000560448 IDH1O75874 414 aaKnown RBP16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 ZSCAN25Q6NSZ9 544 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 CDCA5Q96FF9 252 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 IDI2Q9BXS1 227 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 STAP2Q9UGK3 403 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 SALL3Q9BXA9 1300 aa16.96■□□□□ 0.31
PKNOX1-209ENST00000560448 CLRN2A0PK11 232 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 UNCXA6NJT0 531 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 ADM5C9JUS6 153 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 TRAF5O00463 557 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 CELF2O95319 508 aaKnown RBP16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 BTDP43251 543 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 PPP4CP60510 307 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 CDC42EP5Q6NZY7 148 aa16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 PIH1D3Q9NQM4 214 aaKnown RBP16.96■□□□□ 0.3
PKNOX1-209ENST00000560448 GOLIM4O00461 696 aa16.95■□□□□ 0.3
PKNOX1-209ENST00000560448 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
PKNOX1-209ENST00000560448 BCL11AQ9H165 835 aa16.95■□□□□ 0.3
PKNOX1-209ENST00000560448 PCDHAC2Q9Y5I4 1007 aa16.95■□□□□ 0.3
PKNOX1-209ENST00000560448 ENTPD3O75355 529 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 RASA3Q14644 834 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 CST9Q5W186 159 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 GBA2Q9HCG7 927 aaPredicted RBP16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 USP40Q9NVE5 1235 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
PKNOX1-209ENST00000560448 ZFYP08048 801 aaPredicted RBP16.93■□□□□ 0.3
PKNOX1-209ENST00000560448 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
PKNOX1-209ENST00000560448 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
PKNOX1-209ENST00000560448 LNPKQ9C0E8 428 aa16.93■□□□□ 0.3
PKNOX1-209ENST00000560448 RFX7Q2KHR2 1363 aa16.93■□□□□ 0.3
PKNOX1-209ENST00000560448 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 RASSF10A6NK89 507 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 PDE1AP54750 535 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 UBE3CQ15386 1083 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 SLC9C2Q5TAH2 1124 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 SAPCD2Q86UD0 394 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 MAGEB6Q8N7X4 407 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 ZNF408Q9H9D4 720 aa16.92■□□□□ 0.3
PKNOX1-209ENST00000560448 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 CYP7A1P22680 504 aa16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 RHBDL3P58872 404 aa16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 MAP3K11Q16584 847 aa16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 CENPQQ7L2Z9 268 aaPredicted RBP16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 ARMC9Q7Z3E5 817 aa16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
PKNOX1-209ENST00000560448 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 PDE6AP16499 860 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 ADD2P35612 726 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 ECE1P42892 770 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 TEPSINQ96N21 525 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 NDUFB9Q9Y6M9 179 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 MYH7P12883 1935 aa16.9■□□□□ 0.3
PKNOX1-209ENST00000560448 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 DCAF15Q66K64 600 aa16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 CNTNAP1P78357 1384 aa16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
PKNOX1-209ENST00000560448 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 TAOK2Q9UL54 1235 aa16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 ZNF532Q9HCE3 1301 aa16.88■□□□□ 0.29
PKNOX1-209ENST00000560448 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 RGS3P49796 1198 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 CACNB3P54284 484 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 FMR1Q06787 632 aaKnown RBP eCLIP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 NFIAQ12857 509 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 ADGRA1Q86SQ6 560 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 PLEKHM2Q8IWE5 1019 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 HUNKP57058 714 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 NBPF12Q5TAG4 269 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 TSHZ3Q63HK5 1081 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 RIOK1Q9BRS2 568 aaKnown RBP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
PKNOX1-209ENST00000560448 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 TTLL12Q14166 644 aaPredicted RBP16.86■□□□□ 0.29
PKNOX1-209ENST00000560448 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms