RNA–Protein interactions for RNA: ENST00000560333.1

PDE8A-212, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-212ENST00000560333 TM4SF1P30408 202 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 USPL1Q5W0Q7 1092 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 CST9Q5W186 159 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
PDE8A-212ENST00000560333 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 CYLDQ9NQC7 956 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 CUL9Q8IWT3 2517 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 LTBP3Q9NS15 1303 aa13.12□□□□□ -0.31
PDE8A-212ENST00000560333 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
PDE8A-212ENST00000560333 CDC14CA4D256 554 aa13.11□□□□□ -0.31
PDE8A-212ENST00000560333 CHL1O00533 1208 aa13.11□□□□□ -0.31
PDE8A-212ENST00000560333 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
PDE8A-212ENST00000560333 CRKLP46109 303 aaKnown RBP13.11□□□□□ -0.31
PDE8A-212ENST00000560333 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
PDE8A-212ENST00000560333 FANCIQ9NVI1 1328 aa13.11□□□□□ -0.31
PDE8A-212ENST00000560333 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 RNMTO43148 476 aaKnown RBP13.1□□□□□ -0.31
PDE8A-212ENST00000560333 NFIXQ14938 502 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 FOXD4L5Q5VV16 416 aaPredicted RBP13.1□□□□□ -0.31
PDE8A-212ENST00000560333 BICDL1Q6ZP65 573 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 MRC1P22897 1456 aa13.1□□□□□ -0.31
PDE8A-212ENST00000560333 SZT2Q5T011 3432 aa13.09□□□□□ -0.31
PDE8A-212ENST00000560333 SERPINB2P05120 415 aa13.09□□□□□ -0.31
PDE8A-212ENST00000560333 CTU1Q7Z7A3 348 aaKnown RBP13.09□□□□□ -0.31
PDE8A-212ENST00000560333 TSR2Q969E8 191 aaKnown RBP13.09□□□□□ -0.31
PDE8A-212ENST00000560333 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
PDE8A-212ENST00000560333 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
PDE8A-212ENST00000560333 IFNL2Q8IZJ0 200 aa13.08□□□□□ -0.32
PDE8A-212ENST00000560333 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
PDE8A-212ENST00000560333 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.32
PDE8A-212ENST00000560333 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
PDE8A-212ENST00000560333 MCCD1P59942 119 aaPredicted RBP13.07□□□□□ -0.32
PDE8A-212ENST00000560333 GNAI1P63096 354 aa13.07□□□□□ -0.32
PDE8A-212ENST00000560333 RNFT1Q5M7Z0 435 aa13.07□□□□□ -0.32
PDE8A-212ENST00000560333 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
PDE8A-212ENST00000560333 BANK1Q8NDB2 785 aa13.07□□□□□ -0.32
PDE8A-212ENST00000560333 ZNF408Q9H9D4 720 aa13.07□□□□□ -0.32
PDE8A-212ENST00000560333 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
PDE8A-212ENST00000560333 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
PDE8A-212ENST00000560333 CALD1Q05682 793 aaKnown RBP13.06□□□□□ -0.32
PDE8A-212ENST00000560333 EXOSC9Q06265 439 aaKnown RBP13.06□□□□□ -0.32
PDE8A-212ENST00000560333 RTF1Q92541 710 aaKnown RBP13.06□□□□□ -0.32
PDE8A-212ENST00000560333 MYH16Q9H6N6 1097 aa13.06□□□□□ -0.32
PDE8A-212ENST00000560333 ZNF277Q9NRM2 450 aaPredicted RBP13.06□□□□□ -0.32
PDE8A-212ENST00000560333 ANKRD31Q8N7Z5 1873 aa13.06□□□□□ -0.32
PDE8A-212ENST00000560333 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
PDE8A-212ENST00000560333 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
PDE8A-212ENST00000560333 PRICKLE2Q7Z3G6 844 aa13.05□□□□□ -0.32
PDE8A-212ENST00000560333 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
PDE8A-212ENST00000560333 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
PDE8A-212ENST00000560333 PITPNM2Q9BZ72 1349 aa13.05□□□□□ -0.32
PDE8A-212ENST00000560333 TRPA1O75762 1119 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 KCNMA1Q12791 1236 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 NR1H3Q13133 447 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 NOGQ13253 232 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
PDE8A-212ENST00000560333 TSPYL6Q8N831 410 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 TJP1Q07157 1748 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 HEG1Q9ULI3 1381 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 UBR2Q8IWV8 1755 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
PDE8A-212ENST00000560333 KCNQ3O43525 872 aa13.03□□□□□ -0.32
PDE8A-212ENST00000560333 VAMP4O75379 141 aa13.03□□□□□ -0.32
PDE8A-212ENST00000560333 LMOD1P29536 600 aaPredicted RBP13.03□□□□□ -0.32
PDE8A-212ENST00000560333 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
PDE8A-212ENST00000560333 SLC52A2Q9HAB3 445 aa13.03□□□□□ -0.32
PDE8A-212ENST00000560333 RCAN3Q9UKA8 241 aa13.03□□□□□ -0.32
PDE8A-212ENST00000560333 ZNF330Q9Y3S2 320 aaPredicted RBP13.03□□□□□ -0.32
PDE8A-212ENST00000560333 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
PDE8A-212ENST00000560333 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
PDE8A-212ENST00000560333 HSP90AB1P08238 724 aaKnown RBP13.02□□□□□ -0.33
PDE8A-212ENST00000560333 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
PDE8A-212ENST00000560333 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
PDE8A-212ENST00000560333 LAS1LQ9Y4W2 734 aaKnown RBP13.02□□□□□ -0.33
PDE8A-212ENST00000560333 TRIOBPQ9H2D6 2365 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 MEN1O00255 615 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
PDE8A-212ENST00000560333 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
PDE8A-212ENST00000560333 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 SAGE1Q9NXZ1 904 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 CACNA1FO60840 1977 aa13.01□□□□□ -0.33
PDE8A-212ENST00000560333 A0A1W2PRU2 124 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 RHOQP17081 205 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 GPC1P35052 558 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 PDE6BP35913 854 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 EPS15P42566 896 aa13□□□□□ -0.33
PDE8A-212ENST00000560333 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
PDE8A-212ENST00000560333 CCDC93Q567U6 631 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms