RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 MAGEB6Q8N7X4 407 aa19.81■□□□□ 0.76
LRRC28-217ENST00000560213 USP40Q9NVE5 1235 aa19.81■□□□□ 0.76
LRRC28-217ENST00000560213 DOCK2Q92608 1830 aa19.81■□□□□ 0.76
LRRC28-217ENST00000560213 GPR75-ASB3A0A0A6YYF3 556 aa19.8■□□□□ 0.76
LRRC28-217ENST00000560213 MAP4K4O95819 1239 aaPredicted RBP19.8■□□□□ 0.76
LRRC28-217ENST00000560213 TNFAIP1Q13829 316 aa19.8■□□□□ 0.76
LRRC28-217ENST00000560213 CDC42EP5Q6NZY7 148 aa19.8■□□□□ 0.76
LRRC28-217ENST00000560213 TMED8Q6PL24 325 aaPredicted RBP19.8■□□□□ 0.76
LRRC28-217ENST00000560213 PLEKHM2Q8IWE5 1019 aa19.8■□□□□ 0.76
LRRC28-217ENST00000560213 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.8■□□□□ 0.76
LRRC28-217ENST00000560213 MAST2Q6P0Q8 1798 aa19.8■□□□□ 0.76
LRRC28-217ENST00000560213 PASKQ96RG2 1323 aa19.79■□□□□ 0.76
LRRC28-217ENST00000560213 TCP10L2B9ZVM9 353 aa19.79■□□□□ 0.76
LRRC28-217ENST00000560213 BAG3O95817 575 aa19.79■□□□□ 0.76
LRRC28-217ENST00000560213 TNNI2P48788 182 aa19.79■□□□□ 0.76
LRRC28-217ENST00000560213 SLC9C2Q5TAH2 1124 aa19.79■□□□□ 0.76
LRRC28-217ENST00000560213 CACNB3P54284 484 aa19.78■□□□□ 0.76
LRRC28-217ENST00000560213 FMR1Q06787 632 aaKnown RBP eCLIP19.78■□□□□ 0.76
LRRC28-217ENST00000560213 DLK2Q6UY11 383 aa19.78■□□□□ 0.76
LRRC28-217ENST00000560213 DEFB129Q9H1M3 183 aa19.78■□□□□ 0.76
LRRC28-217ENST00000560213 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
LRRC28-217ENST00000560213 PDE6AP16499 860 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 ZSCAN25Q6NSZ9 544 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 KBTBD3Q8NAB2 608 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 OSBPL3Q9H4L5 887 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 ZNF408Q9H9D4 720 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 AATFQ9NY61 560 aaKnown RBP eCLIP19.77■□□□□ 0.76
LRRC28-217ENST00000560213 PPP2R3BQ9Y5P8 575 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 TRPM7Q96QT4 1865 aa19.77■□□□□ 0.76
LRRC28-217ENST00000560213 PLCG2P16885 1265 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 PDE4AP27815 886 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 APLP1P51693 650 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 RASA3Q14644 834 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 FKBP1CQ5VVH2 108 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 PRAMEF18Q5VWM3 479 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 ADGRA1Q86SQ6 560 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 MYH7P12883 1935 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 ZNF532Q9HCE3 1301 aa19.76■□□□□ 0.75
LRRC28-217ENST00000560213 CELF2O95319 508 aaKnown RBP19.75■□□□□ 0.75
LRRC28-217ENST00000560213 PPP4CP60510 307 aa19.75■□□□□ 0.75
LRRC28-217ENST00000560213 LRRFIP1Q32MZ4 808 aaKnown RBP19.75■□□□□ 0.75
LRRC28-217ENST00000560213 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 HSPA6P17066 643 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 NF2P35240 595 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 ADD2P35612 726 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 RHBDL3P58872 404 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 TCP10Q12799 353 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 FAM83AQ86UY5 434 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 CERS3Q8IU89 383 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 MIGA1Q8NAN2 632 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 EVI5LQ96CN4 794 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 FSD1Q9BTV5 496 aa19.74■□□□□ 0.75
LRRC28-217ENST00000560213 TRIM6-TRIM34B2RNG4 842 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 DYNLL1P63167 89 aaKnown RBP19.73■□□□□ 0.75
LRRC28-217ENST00000560213 NFIAQ12857 509 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 UBE3CQ15386 1083 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 CST9Q5W186 159 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 TEX11Q8IYF3 940 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 SH3RF3Q8TEJ3 882 aaPredicted RBP19.73■□□□□ 0.75
LRRC28-217ENST00000560213 IDI2Q9BXS1 227 aa19.73■□□□□ 0.75
LRRC28-217ENST00000560213 AK9Q5TCS8 1911 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 MAGEB6P1A0A0J9YX57 407 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 TCRBV5S4A2TA0A5A2 114 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 RNF113AO15541 343 aaKnown RBP19.72■□□□□ 0.75
LRRC28-217ENST00000560213 ZFYP08048 801 aaPredicted RBP19.72■□□□□ 0.75
LRRC28-217ENST00000560213 RGS3P49796 1198 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 PICALMQ13492 652 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 SUPT20HL1Q3ZLR7 823 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 FAM151AQ8WW52 585 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 TMEM39BQ9GZU3 492 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 FAM198AQ9UFP1 575 aa19.72■□□□□ 0.75
LRRC28-217ENST00000560213 CNTNAP1P78357 1384 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 ENTPD3O75355 529 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 WDHD1O75717 1129 aaPredicted RBP19.71■□□□□ 0.75
LRRC28-217ENST00000560213 SLFNL1Q499Z3 407 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 C2orf69Q8N8R5 385 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 RILPL2Q969X0 211 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 GBA2Q9HCG7 927 aaPredicted RBP19.71■□□□□ 0.75
LRRC28-217ENST00000560213 CREBZFQ9NS37 354 aa19.71■□□□□ 0.75
LRRC28-217ENST00000560213 CHGBP05060 677 aa19.7■□□□□ 0.74
LRRC28-217ENST00000560213 NBPF12Q5TAG4 269 aaPredicted RBP19.7■□□□□ 0.74
LRRC28-217ENST00000560213 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 TTLL12Q14166 644 aaPredicted RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 ZFPM1Q8IX07 1006 aa19.69■□□□□ 0.74
LRRC28-217ENST00000560213 TGFBRAP1Q8WUH2 860 aa19.69■□□□□ 0.74
LRRC28-217ENST00000560213 TEPSINQ96N21 525 aa19.69■□□□□ 0.74
LRRC28-217ENST00000560213 RIOK1Q9BRS2 568 aaKnown RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 DDX4Q9NQI0 724 aaKnown RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 ABT1Q9ULW3 272 aaKnown RBP19.69■□□□□ 0.74
LRRC28-217ENST00000560213 USP5P45974 858 aa19.68■□□□□ 0.74
LRRC28-217ENST00000560213 TTC22Q5TAA0 569 aa19.68■□□□□ 0.74
LRRC28-217ENST00000560213 APPBP2Q92624 585 aa19.68■□□□□ 0.74
LRRC28-217ENST00000560213 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
LRRC28-217ENST00000560213 HOOK2Q96ED9 719 aa19.68■□□□□ 0.74
LRRC28-217ENST00000560213 PPP1R12BO60237 982 aaPredicted RBP19.67■□□□□ 0.74
LRRC28-217ENST00000560213 MBD4O95243 580 aa19.67■□□□□ 0.74
LRRC28-217ENST00000560213 FKBP1BP68106 108 aa19.67■□□□□ 0.74
LRRC28-217ENST00000560213 PRKG1Q13976 671 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms