RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 FBXO27Q8NI29 283 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 DDX54Q8TDD1 881 aaKnown RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 ANKRD24Q8TF21 1146 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 BSNDQ8WZ55 320 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 NECAB3Q96P71 396 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 DEPDC7Q96QD5 511 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 PBX4Q9BYU1 374 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 BHLHE41Q9C0J9 482 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 LACRTQ9GZZ8 138 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 SLKQ9H2G2 1235 aaPredicted RBP3.29□□□□□ -1.88
GABPB1-209ENST00000559100 ZNF576Q9H609 170 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 ST7Q9NRC1 585 aa3.29□□□□□ -1.88
GABPB1-209ENST00000559100 ROBO2Q9HCK4 1378 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 GREM1O60565 184 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 PTPRAP18433 802 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 ITPKAP23677 461 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 CDC25BP30305 580 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 CABP4P57796 275 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 ANAPC15P60006 121 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 RPS26P62854 115 aaKnown RBP3.28□□□□□ -1.88
GABPB1-209ENST00000559100 GPLD1P80108 840 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 PCDH1Q08174 1060 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 FAAP100Q0VG06 881 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 SERINC3Q13530 473 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 EGFLAMQ63HQ2 1017 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 LLGL2Q6P1M3 1020 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 GK5Q6ZS86 529 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 SYT9Q86SS6 491 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 ALYREFQ86V81 257 aaKnown RBP3.28□□□□□ -1.88
GABPB1-209ENST00000559100 SULF2Q8IWU5 870 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 TRIM42Q8IWZ5 723 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 NEDD1Q8NHV4 660 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 MKL1Q969V6 931 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 ACSBG1Q96GR2 724 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 POP1Q99575 1024 aaKnown RBP3.28□□□□□ -1.88
GABPB1-209ENST00000559100 EMILIN2Q9BXX0 1053 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 MUC3BQ9H195 1237 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 CLEC4MQ9H2X3 399 aaPredicted RBP3.28□□□□□ -1.88
GABPB1-209ENST00000559100 DNAJB12Q9NXW2 375 aaKnown RBP3.28□□□□□ -1.88
GABPB1-209ENST00000559100 SNTG2Q9NY99 539 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 ACTR10Q9NZ32 417 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 PCDHB5Q9Y5E4 795 aa3.28□□□□□ -1.88
GABPB1-209ENST00000559100 C1QTNF9BB2RNN3 333 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GPR25O00155 361 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 PPP1R12AO14974 1030 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GRIN3BO60391 1043 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 CDC45O75419 566 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 THBS1P07996 1170 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 BMP4P12644 408 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GARTP22102 1010 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 NME2P22392 152 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 PCBP4P57723 403 aaKnown RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 IGBP1P78318 339 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 MPP2Q14168 576 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 PTPROQ16827 1216 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 TAF7LQ5H9L4 462 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GDF6Q6KF10 455 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 ELMSAN1Q6PJG2 1045 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 CCDC84Q86UT8 332 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 SLITRK4Q8IW52 837 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 ZCRB1Q8TBF4 217 aaKnown RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 TRPM4Q8TD43 1214 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GATAD2BQ8WXI9 593 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 SLC7A3Q8WY07 619 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 PLD4Q96BZ4 506 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 ZNF837Q96EG3 531 aaPredicted RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 GMCL1Q96IK5 515 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 DNAJC7Q99615 494 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 SMG9Q9H0W8 520 aaKnown RBP3.27□□□□□ -1.89
GABPB1-209ENST00000559100 BRMS1Q9HCU9 246 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 KCNQ5Q9NR82 932 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 CYP8B1Q9UNU6 501 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 PCDHB14Q9Y5E9 798 aa3.27□□□□□ -1.89
GABPB1-209ENST00000559100 SLC35F4A4IF30 521 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 FAM221BA6H8Z2 402 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 ZBTB42B2RXF5 422 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 NFKBIEO00221 500 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 KLF4O43474 513 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 HYAL3O43820 417 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 DDAH1O94760 285 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 IMPDH2P12268 514 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 HOXD8P13378 290 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 ITGA6P23229 1130 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 ARNTP27540 789 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 CTBSQ01459 385 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 GSTM4Q03013 218 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 IKBKEQ14164 716 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 MLECQ14165 292 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 FXNQ16595 210 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 MTERF2Q49AM1 385 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 ZNF468Q5VIY5 522 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 MAP1SQ66K74 1059 aaPredicted RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 REC114Q7Z4M0 266 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 FILIP1Q7Z7B0 1213 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 FAM169BQ8N8A8 192 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 OR6P1Q8NGX9 317 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 GRIN3AQ8TCU5 1115 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 SH3TC2Q8TF17 1288 aa3.26□□□□□ -1.89
GABPB1-209ENST00000559100 NANOS1Q8WY41 292 aaKnown RBP3.26□□□□□ -1.89
GABPB1-209ENST00000559100 KCNB2Q92953 911 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms