RNA–Protein interactions for RNA: ENST00000558485.1

NEO1-203, Transcript of neogenin 1, humanhuman

TSL 2

Gene NEO1, Length 374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-203ENST00000558485 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
NEO1-203ENST00000558485 ESYT1Q9BSJ8 1104 aa12.35□□□□□ -0.43
NEO1-203ENST00000558485 ARMT1Q9H993 441 aa12.35□□□□□ -0.43
NEO1-203ENST00000558485 HELLSQ9NRZ9 838 aa12.35□□□□□ -0.43
NEO1-203ENST00000558485 DDX60LQ5H9U9 1706 aaKnown RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 H7C1D1 291 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 SGSM2O43147 1006 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 MBD4O95243 580 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 MMP14P50281 582 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 RHBDL3P58872 404 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 PPP4CP60510 307 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 DLGAP5Q15398 846 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 MCMDC2Q4G0Z9 681 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 TBC1D10BQ4KMP7 808 aaPredicted RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 RBM26Q5T8P6 1007 aaKnown RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
NEO1-203ENST00000558485 NAV1Q8NEY1 1877 aa12.34□□□□□ -0.43
NEO1-203ENST00000558485 WNT10BO00744 389 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 FOXP2O15409 715 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 GPAA1O43292 621 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 PRKAB2O43741 272 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 NBPF9Q3BBW0 867 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 STRBPQ96SI9 672 aaKnown RBP12.33□□□□□ -0.44
NEO1-203ENST00000558485 TDRD3Q9H7E2 651 aaKnown RBP12.33□□□□□ -0.44
NEO1-203ENST00000558485 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
NEO1-203ENST00000558485 HACL1Q9UJ83 578 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 ASTN2O75129 1339 aaPredicted RBP12.33□□□□□ -0.44
NEO1-203ENST00000558485 CCDC171Q6TFL3 1326 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 RAD50Q92878 1312 aa12.33□□□□□ -0.44
NEO1-203ENST00000558485 BAG3O95817 575 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 EPHX2P34913 555 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 AIDAQ96BJ3 306 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
NEO1-203ENST00000558485 TAF1DQ9H5J8 278 aaPredicted RBP12.32□□□□□ -0.44
NEO1-203ENST00000558485 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 USP40Q9NVE5 1235 aa12.32□□□□□ -0.44
NEO1-203ENST00000558485 BAZ2AQ9UIF9 1905 aaKnown RBP12.31□□□□□ -0.44
NEO1-203ENST00000558485 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
NEO1-203ENST00000558485 CACNB3P54284 484 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
NEO1-203ENST00000558485 SDR42E1Q8WUS8 393 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 NMRK2Q9NPI5 230 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
NEO1-203ENST00000558485 ZNF70Q9UC06 446 aaPredicted RBP12.31□□□□□ -0.44
NEO1-203ENST00000558485 MYH1P12882 1939 aa12.31□□□□□ -0.44
NEO1-203ENST00000558485 LAMB1P07942 1786 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 IQCA1LA6NCM1 817 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 GSG1L2A8MUP6 293 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 SEC24BO95487 1268 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 PTH1RQ03431 593 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 NFIAQ12857 509 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 USP50Q70EL3 339 aaPredicted RBP12.3□□□□□ -0.44
NEO1-203ENST00000558485 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 TEX11Q8IYF3 940 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
NEO1-203ENST00000558485 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
NEO1-203ENST00000558485 EPB41L4AQ9HCS5 686 aaPredicted RBP12.3□□□□□ -0.44
NEO1-203ENST00000558485 MKRN1Q9UHC7 482 aaKnown RBP12.3□□□□□ -0.44
NEO1-203ENST00000558485 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 LAMA4Q16363 1823 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
NEO1-203ENST00000558485 HSPD1P10809 573 aaKnown RBP12.29□□□□□ -0.44
NEO1-203ENST00000558485 PLCG2P16885 1265 aa12.29□□□□□ -0.44
NEO1-203ENST00000558485 ANGEL2Q5VTE6 544 aaKnown RBP12.29□□□□□ -0.44
NEO1-203ENST00000558485 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
NEO1-203ENST00000558485 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
NEO1-203ENST00000558485 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
NEO1-203ENST00000558485 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
NEO1-203ENST00000558485 FLT1P17948 1338 aa12.29□□□□□ -0.44
NEO1-203ENST00000558485 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 PATL2C9JE40 543 aaKnown RBP12.28□□□□□ -0.44
NEO1-203ENST00000558485 MYO1BO43795 1136 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 POTEIP0CG38 1075 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
NEO1-203ENST00000558485 GNAT2P19087 354 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 USP5P45974 858 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
NEO1-203ENST00000558485 PICALMQ13492 652 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 MAPKAPK5Q8IW41 473 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 ZFPM1Q8IX07 1006 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 IFNL3Q8IZI9 196 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 DSCC1Q9BVC3 393 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
NEO1-203ENST00000558485 GGA3Q9NZ52 723 aa12.28□□□□□ -0.44
NEO1-203ENST00000558485 POLR2AP24928 1970 aaKnown RBP12.28□□□□□ -0.44
NEO1-203ENST00000558485 EVX2Q03828 476 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms