RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 IGSF3O75054 1194 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 BTDP43251 543 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 NUCB1Q02818 461 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 TTF1Q15361 905 aaPredicted RBP15.2■□□□□ 0.02
LRRC28-206ENST00000558471 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 LNPKQ9C0E8 428 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 PAG1Q9NWQ8 432 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 TMOD2Q9NZR1 351 aa15.2■□□□□ 0.02
LRRC28-206ENST00000558471 TTC41PQ6P2S7 1318 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 MX1P20591 662 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 FKBP1CQ5VVH2 108 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 ADGRA1Q86SQ6 560 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 CHD1LQ86WJ1 897 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 PPP2R3BQ9Y5P8 575 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 CNTNAP1P78357 1384 aa15.19■□□□□ 0.02
LRRC28-206ENST00000558471 AK9Q5TCS8 1911 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 CYP7A1P22680 504 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 TNNI2P48788 182 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 RHBDL3P58872 404 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 NFIAQ12857 509 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 NBPF12Q5TAG4 269 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-206ENST00000558471 DNAJC5GQ8N7S2 189 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 PI4K2BQ8TCG2 481 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 TEPSINQ96N21 525 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 TMEM39BQ9GZU3 492 aa15.18■□□□□ 0.02
LRRC28-206ENST00000558471 GBA2Q9HCG7 927 aaPredicted RBP15.18■□□□□ 0.02
LRRC28-206ENST00000558471 ABT1Q9ULW3 272 aaKnown RBP15.18■□□□□ 0.02
LRRC28-206ENST00000558471 MYH7P12883 1935 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 FAM83AQ86UY5 434 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 CDAN1Q8IWY9 1227 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 C2orf69Q8N8R5 385 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 AATFQ9NY61 560 aaKnown RBP eCLIP15.17■□□□□ 0.02
LRRC28-206ENST00000558471 FAM198AQ9UFP1 575 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 STAP2Q9UGK3 403 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 TLL2Q9Y6L7 1015 aa15.17■□□□□ 0.02
LRRC28-206ENST00000558471 ERC2O15083 957 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 WDHD1O75717 1129 aaPredicted RBP15.16■□□□□ 0.02
LRRC28-206ENST00000558471 GLRX3O76003 335 aaKnown RBP15.16■□□□□ 0.02
LRRC28-206ENST00000558471 PDE6AP16499 860 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 NF2P35240 595 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 PDE1AP54750 535 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 PPP4CP60510 307 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 TCP10Q12799 353 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 SUPT20HL1Q3ZLR7 823 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 SLC9C2Q5TAH2 1124 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 MOB2Q70IA6 237 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 FAM151AQ8WW52 585 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 IDI2Q9BXS1 227 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 MKRN1Q9UHC7 482 aaKnown RBP15.16■□□□□ 0.02
LRRC28-206ENST00000558471 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
LRRC28-206ENST00000558471 RASSF10A6NK89 507 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 BAG3O95817 575 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 MAP4K4O95819 1239 aaPredicted RBP15.15■□□□□ 0.02
LRRC28-206ENST00000558471 RGS3P49796 1198 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 DYNLL1P63167 89 aaKnown RBP15.15■□□□□ 0.02
LRRC28-206ENST00000558471 PRKG1Q13976 671 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 SLFNL1Q499Z3 407 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
LRRC28-206ENST00000558471 ZFPM1Q8IX07 1006 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 SH3RF3Q8TEJ3 882 aaPredicted RBP15.15■□□□□ 0.02
LRRC28-206ENST00000558471 NOL10Q9BSC4 688 aaKnown RBP15.15■□□□□ 0.02
LRRC28-206ENST00000558471 FZD1Q9UP38 647 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
LRRC28-206ENST00000558471 RFX7Q2KHR2 1363 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 PAPPA2Q9BXP8 1791 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 TCRBV5S4A2TA0A5A2 114 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 CHGBP05060 677 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 NEFLP07196 543 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 ADD2P35612 726 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 HUNKP57058 714 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 FKBP1BP68106 108 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 TTLL12Q14166 644 aaPredicted RBP15.14■□□□□ 0.01
LRRC28-206ENST00000558471 PLEKHM2Q8IWE5 1019 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 MIGA1Q8NAN2 632 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
LRRC28-206ENST00000558471 SSC5DA1L4H1 1573 aa15.14■□□□□ 0.01
LRRC28-206ENST00000558471 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 ENTPD3O75355 529 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 PICALMQ13492 652 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 KLRG1Q96E93 195 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.13■□□□□ 0.01
LRRC28-206ENST00000558471 ANGEL1Q9UNK9 670 aaKnown RBP15.13■□□□□ 0.01
LRRC28-206ENST00000558471 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
LRRC28-206ENST00000558471 USP2O75604 605 aaPredicted RBP15.12■□□□□ 0.01
LRRC28-206ENST00000558471 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
LRRC28-206ENST00000558471 PLCG2P16885 1265 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 PDE4AP27815 886 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 SH3BP5LQ7L8J4 393 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 ARMC9Q7Z3E5 817 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 HHIPL1Q96JK4 782 aa15.12■□□□□ 0.01
LRRC28-206ENST00000558471 RIOK1Q9BRS2 568 aaKnown RBP15.12■□□□□ 0.01
LRRC28-206ENST00000558471 RPAP1Q9BWH6 1393 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms