RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 STAMQ92783 540 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 TMEM87BQ96K49 555 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 ZBTB1Q9Y2K1 713 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 SCARF1Q14162 830 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 KARSQ15046 597 aaKnown RBP17.72■□□□□ 0.43
AP4E1-202ENST00000558439 LPIN2Q92539 896 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 VAT1LQ9HCJ6 419 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.72■□□□□ 0.43
AP4E1-202ENST00000558439 DIP2BQ9P265 1576 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 BTBD18B2RXH4 712 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 STX8Q9UNK0 236 aa17.72■□□□□ 0.43
AP4E1-202ENST00000558439 BCAMP50895 628 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 ZNF827Q17R98 1081 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 GOLPH3LQ9H4A5 285 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 GPR108Q9NPR9 543 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 NLRP12P59046 1061 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 FOXO4P98177 505 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 DDB1Q16531 1140 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
AP4E1-202ENST00000558439 WWC3Q9ULE0 1092 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 ZNF174Q15697 407 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 ATG9AQ7Z3C6 839 aa17.71■□□□□ 0.43
AP4E1-202ENST00000558439 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
AP4E1-202ENST00000558439 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
AP4E1-202ENST00000558439 HLFQ16534 295 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 ZNF609O15014 1411 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 N4BP3O15049 544 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 CLSTN1O94985 981 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
AP4E1-202ENST00000558439 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
AP4E1-202ENST00000558439 ELF2Q15723 593 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 NCAPD2Q15021 1401 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 CCDC194A0A1B0GVG4 234 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 HSP90B2PQ58FF3 399 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
AP4E1-202ENST00000558439 ZPR1O75312 459 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 PDE8BO95263 885 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 ST3GAL1Q11201 340 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 STIM1Q13586 685 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
AP4E1-202ENST00000558439 SOGA3Q5TF21 947 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 GIGYF2Q6Y7W6 1299 aaKnown RBP17.69■□□□□ 0.42
AP4E1-202ENST00000558439 RRAGBQ5VZM2 374 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 PLIN2Q99541 437 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 ZNF215Q9UL58 517 aaPredicted RBP17.69■□□□□ 0.42
AP4E1-202ENST00000558439 CIAO1O76071 339 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 RFX5P48382 616 aaPredicted RBP17.69■□□□□ 0.42
AP4E1-202ENST00000558439 GOLGA8FQ08AF8 430 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 GOLGA8DPQ0D2H9 430 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 ZNF444Q8N0Y2 327 aaPredicted RBP17.69■□□□□ 0.42
AP4E1-202ENST00000558439 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
AP4E1-202ENST00000558439 PXDNLA1KZ92 1463 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 VWA3AA6NCI4 1184 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 PRKAB2O43741 272 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 KIF5CO60282 957 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
AP4E1-202ENST00000558439 APOA5Q6Q788 366 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 MRFAP1L1Q96HT8 127 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 ZHX3Q9H4I2 956 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 WDR17Q8IZU2 1322 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 PIGBQ92521 554 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 ZNHIT6Q9NWK9 470 aaKnown RBP17.68■□□□□ 0.42
AP4E1-202ENST00000558439 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 MAPK8IP1Q9UQF2 711 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 NFE2L3Q9Y4A8 694 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 MCAMP43121 646 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 PDE4CQ08493 712 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 KCNF1Q9H3M0 494 aa17.68■□□□□ 0.42
AP4E1-202ENST00000558439 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 MCM7P33993 719 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 PIH1D3Q9NQM4 214 aaKnown RBP17.67■□□□□ 0.42
AP4E1-202ENST00000558439 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 MED23Q9ULK4 1368 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 PATL2C9JE40 543 aaKnown RBP17.67■□□□□ 0.42
AP4E1-202ENST00000558439 CMA1P23946 247 aa17.67■□□□□ 0.42
AP4E1-202ENST00000558439 NAA30Q147X3 362 aaPredicted RBP17.67■□□□□ 0.42
AP4E1-202ENST00000558439 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
AP4E1-202ENST00000558439 KIF23Q02241 960 aaPredicted RBP17.66■□□□□ 0.42
AP4E1-202ENST00000558439 TSGA10IPQ3SY00 556 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
AP4E1-202ENST00000558439 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 KAT14Q9H8E8 782 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 AP5Z1O43299 807 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 GNAT2P19087 354 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 UBA7P41226 1012 aa17.66■□□□□ 0.42
AP4E1-202ENST00000558439 IKQ13123 557 aaPredicted RBP17.66■□□□□ 0.42
AP4E1-202ENST00000558439 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms