RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 VSNL1P62760 191 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 BLMHQ13867 455 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 PRG4Q92954 1404 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 TTC22Q5TAA0 569 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 PLEKHM2Q8IWE5 1019 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 AFAP1Q8N556 730 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 SPIRE2Q8WWL2 714 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 NAT10Q9H0A0 1025 aaKnown RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 PIDD1Q9HB75 910 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 GNAQP50148 359 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 RIN2Q8WYP3 895 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 STAMBPL1Q96FJ0 436 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 BRD8Q9H0E9 1235 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 C15orf41Q9Y2V0 281 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 TESPA1A2RU30 521 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 SSBP05455 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 TMED1Q13445 227 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 KIF4BQ2VIQ3 1234 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 CCDC80Q76M96 950 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 DHX58Q96C10 678 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 EVI5LQ96CN4 794 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 TESK2Q96S53 571 aa12.49□□□□□ -0.41
SEMA4B-204ENST00000558065 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 MYO1EQ12965 1108 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 ME3Q16798 604 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 GPCPD1Q9NPB8 672 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 TUBGCP4Q9UGJ1 667 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 MYBL1P10243 752 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 ADCY1Q08828 1119 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 PPFIA1Q13136 1202 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 SAMD3Q8N6K7 520 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 CAPS2Q9BXY5 557 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 BARX2Q9UMQ3 279 aaPredicted RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 THRAP3Q9Y2W1 955 aaKnown RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 SF3B2Q13435 895 aaKnown RBP12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 KBTBD12Q3ZCT8 623 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 ATF7IPQ6VMQ6 1270 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 HDAC7Q8WUI4 952 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 TAF4BQ92750 862 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 DTNBP1Q96EV8 351 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 ZWILCHQ9H900 591 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
SEMA4B-204ENST00000558065 OPLAHO14841 1288 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 STX6O43752 255 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 MYO1BO43795 1136 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 CHMP4BP1P59074 171 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 DACT1Q9NYF0 836 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 MED14O60244 1454 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 POLR3AO14802 1390 aaPredicted RBP12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 POTEB2H3BUK9 544 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 CA8P35219 290 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 RABL2BQ9UNT1 228 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 KIF3BO15066 747 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 VIL1P09327 827 aaKnown RBP12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 FAM200BP0CF97 657 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 ABL2P42684 1182 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 WDR35Q9P2L0 1181 aa12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
SEMA4B-204ENST00000558065 LMTK2Q8IWU2 1503 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 KRT38O76015 456 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 FUT4P22083 530 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 CTCFP49711 727 aaPredicted RBP12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 GNGT1P63211 74 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 CCDC57Q2TAC2 916 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 HPCAL4Q9UM19 191 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 NOS1P29475 1434 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 SMIM24O75264 130 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 POSTNQ15063 836 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 APBB1IPQ7Z5R6 666 aaPredicted RBP12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 DHX40Q8IX18 779 aaKnown RBP12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 RMDN2Q96LZ7 410 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 ZSWIM4Q9H7M6 989 aa12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 HOOK1Q9UJC3 728 aaKnown RBP12.46□□□□□ -0.41
SEMA4B-204ENST00000558065 CHMP3Q9Y3E7 222 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms