RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GRIPAP1Q4V328 841 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 AKNAD1Q5T1N1 836 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 STAG1Q8WVM7 1258 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 PDGFDQ9GZP0 370 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-233ENST00000557529 ATP8A2Q9NTI2 1148 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 ANAPC4Q9UJX5 808 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 CCDC88AQ3V6T2 1871 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 KIAA1551Q9HCM1 1747 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 G3V3G9 751 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 EVCP57679 992 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 PPP4CP60510 307 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 MFSD14BQ5SR56 506 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 MFSD6Q6ZSS7 791 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 NECAB1Q8N987 351 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 SUPT20HQ8NEM7 779 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 SDR42E1Q8WUS8 393 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 ZNF274Q96GC6 653 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-233ENST00000557529 RTFDC1Q9BY42 306 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-233ENST00000557529 LRRC2Q9BYS8 371 aa14.73□□□□□ -0.05
SHMT2-233ENST00000557529 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHMT2-233ENST00000557529 WDR33Q9C0J8 1336 aaKnown RBP14.72□□□□□ -0.05
SHMT2-233ENST00000557529 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 PFKFB2O60825 505 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 BRD1O95696 1058 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 PCP11498 1178 aaKnown RBP14.72□□□□□ -0.05
SHMT2-233ENST00000557529 PTMSP20962 102 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 PPARAQ07869 468 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 ST3GAL1Q11201 340 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 OLFM4Q6UX06 510 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 TMEM87BQ96K49 555 aa14.72□□□□□ -0.05
SHMT2-233ENST00000557529 LLPHQ9BRT6 129 aaKnown RBP14.72□□□□□ -0.05
SHMT2-233ENST00000557529 MROH7-TTC4A0A0A0MT08 1334 aa14.71□□□□□ -0.05
SHMT2-233ENST00000557529 PLCG2P16885 1265 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 PDCP20941 246 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 ANTXR2P58335 489 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 GTF2IP78347 998 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 PODNQ7Z5L7 613 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 C7orf43Q8WVR3 580 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 FAM163AQ96GL9 167 aaPredicted RBP14.71□□□□□ -0.06
SHMT2-233ENST00000557529 MTA3Q9BTC8 594 aa14.71□□□□□ -0.06
SHMT2-233ENST00000557529 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 POLD1P28340 1107 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 GJB2P29033 226 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 APOBRQ0VD83 1088 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 STK3Q13188 491 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 PKP1Q13835 747 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 CHST3Q7LGC8 479 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 TTLL6Q8N841 843 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 ARPP21Q9UBL0 812 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-233ENST00000557529 ZDHHC9Q9Y397 364 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 NEDD4P46934 1319 aa14.7□□□□□ -0.06
SHMT2-233ENST00000557529 SLX4Q8IY92 1834 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 GPR75-ASB3A0A0A6YYF3 556 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 MINDY4BA8MYZ0 360 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 B4E1Z4 1266 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
SHMT2-233ENST00000557529 NT5C2P49902 561 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 SART3Q15020 963 aaKnown RBP14.69□□□□□ -0.06
SHMT2-233ENST00000557529 DIXDC1Q155Q3 683 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 GRIK5Q16478 980 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 CTR9Q6PD62 1173 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 MTFR1LQ9H019 292 aa14.69□□□□□ -0.06
SHMT2-233ENST00000557529 DCP1AQ9NPI6 582 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-233ENST00000557529 ANGEL1Q9UNK9 670 aaKnown RBP14.69□□□□□ -0.06
SHMT2-233ENST00000557529 SH2B2O14492 632 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-233ENST00000557529 STX6O43752 255 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 DHX16O60231 1041 aaKnown RBP14.68□□□□□ -0.06
SHMT2-233ENST00000557529 BAG4O95429 457 aaKnown RBP14.68□□□□□ -0.06
SHMT2-233ENST00000557529 SYT1P21579 422 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 PDIA3P30101 505 aaKnown RBP14.68□□□□□ -0.06
SHMT2-233ENST00000557529 SCRN1Q12765 414 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 DOK7Q18PE1 504 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 CYB5R4Q7L1T6 521 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 ESR2Q92731 530 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 KIF3AQ9Y496 699 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 GAKO14976 1311 aa14.68□□□□□ -0.06
SHMT2-233ENST00000557529 DLEC1Q9Y238 1755 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 KLF18A0A0U1RQI7 1052 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 USP17L12C9JPN9 530 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 USP17L21D6R901 530 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 KDM4AO75164 1064 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 FGRP09769 529 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 LIFRP42702 1097 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 BTDP43251 543 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 USP5P45974 858 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 TGFB2P61812 414 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 FKBP1AP62942 108 aaKnown RBP14.67□□□□□ -0.06
SHMT2-233ENST00000557529 HMGN5P82970 282 aaKnown RBP14.67□□□□□ -0.06
SHMT2-233ENST00000557529 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 FBXW7Q969H0 707 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 TOMM22Q9NS69 142 aa14.67□□□□□ -0.06
SHMT2-233ENST00000557529 ZNF219Q9P2Y4 722 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms