RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 SULF1Q8IWU6 871 aa25.42■■□□□ 1.66
SEC23A-213ENST00000557280 MAGEB6Q8N7X4 407 aa25.42■■□□□ 1.66
SEC23A-213ENST00000557280 CCDC136Q96JN2 1154 aa25.42■■□□□ 1.66
SEC23A-213ENST00000557280 ERC2O15083 957 aa25.41■■□□□ 1.66
SEC23A-213ENST00000557280 GSTO1P78417 241 aa25.41■■□□□ 1.66
SEC23A-213ENST00000557280 CENPQQ7L2Z9 268 aaPredicted RBP25.41■■□□□ 1.66
SEC23A-213ENST00000557280 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
SEC23A-213ENST00000557280 GPR75-ASB3A0A0A6YYF3 556 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 TCP10L2B9ZVM9 353 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 PDE6AP16499 860 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 CYP7A1P22680 504 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 MAP3K12Q12852 859 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 APOBEC3FQ8IUX4 373 aaKnown RBP25.4■■□□□ 1.66
SEC23A-213ENST00000557280 SLF2Q8IX21 1173 aa25.4■■□□□ 1.66
SEC23A-213ENST00000557280 USP40Q9NVE5 1235 aa25.39■■□□□ 1.66
SEC23A-213ENST00000557280 CNTNAP1P78357 1384 aa25.39■■□□□ 1.65
SEC23A-213ENST00000557280 RFX7Q2KHR2 1363 aa25.39■■□□□ 1.65
SEC23A-213ENST00000557280 TCRBV5S4A2TA0A5A2 114 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 RHBDL3P58872 404 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 NFIAQ12857 509 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 SLC9C2Q5TAH2 1124 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 CDAN1Q8IWY9 1227 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 CDCA5Q96FF9 252 aa25.38■■□□□ 1.65
SEC23A-213ENST00000557280 ZNF532Q9HCE3 1301 aa25.37■■□□□ 1.65
SEC23A-213ENST00000557280 LDHCP07864 332 aa25.37■■□□□ 1.65
SEC23A-213ENST00000557280 KBTBD3Q8NAB2 608 aa25.37■■□□□ 1.65
SEC23A-213ENST00000557280 MIGA1Q8NAN2 632 aa25.37■■□□□ 1.65
SEC23A-213ENST00000557280 DEFB129Q9H1M3 183 aa25.37■■□□□ 1.65
SEC23A-213ENST00000557280 AATFQ9NY61 560 aaKnown RBP eCLIP25.37■■□□□ 1.65
SEC23A-213ENST00000557280 SSC5DA1L4H1 1573 aa25.36■■□□□ 1.65
SEC23A-213ENST00000557280 ADD2P35612 726 aa25.36■■□□□ 1.65
SEC23A-213ENST00000557280 DYNLL1P63167 89 aaKnown RBP25.36■■□□□ 1.65
SEC23A-213ENST00000557280 RASA3Q14644 834 aa25.36■■□□□ 1.65
SEC23A-213ENST00000557280 OSBPL3Q9H4L5 887 aa25.36■■□□□ 1.65
SEC23A-213ENST00000557280 ZNF408Q9H9D4 720 aa25.36■■□□□ 1.65
SEC23A-213ENST00000557280 MYH7P12883 1935 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 IGSF3O75054 1194 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 WDHD1O75717 1129 aaPredicted RBP25.35■■□□□ 1.65
SEC23A-213ENST00000557280 ERICH6BQ5W0A0 696 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 CST9Q5W186 159 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 SH3RF3Q8TEJ3 882 aaPredicted RBP25.35■■□□□ 1.65
SEC23A-213ENST00000557280 TMEM39BQ9GZU3 492 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 DDX4Q9NQI0 724 aaKnown RBP25.35■■□□□ 1.65
SEC23A-213ENST00000557280 PPP4R2Q9NY27 417 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 TMOD2Q9NZR1 351 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 FAM198AQ9UFP1 575 aa25.35■■□□□ 1.65
SEC23A-213ENST00000557280 CELF2O95319 508 aaKnown RBP25.34■■□□□ 1.65
SEC23A-213ENST00000557280 APLP1P51693 650 aa25.34■■□□□ 1.65
SEC23A-213ENST00000557280 HTRA3P83110 453 aa25.34■■□□□ 1.65
SEC23A-213ENST00000557280 TRPM7Q96QT4 1865 aa25.34■■□□□ 1.65
SEC23A-213ENST00000557280 TCP10Q12799 353 aa25.33■■□□□ 1.65
SEC23A-213ENST00000557280 ZFPM1Q8IX07 1006 aa25.33■■□□□ 1.65
SEC23A-213ENST00000557280 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.33■■□□□ 1.659e-8■■■□□ 17.1
SEC23A-213ENST00000557280 HSPA6P17066 643 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 RGS3P49796 1198 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 PPP4CP60510 307 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 TNFAIP1Q13829 316 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 FKBP1CQ5VVH2 108 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 TEPSINQ96N21 525 aa25.32■■□□□ 1.64
SEC23A-213ENST00000557280 PICALMQ13492 652 aa25.31■■□□□ 1.64
SEC23A-213ENST00000557280 NBPF12Q5TAG4 269 aaPredicted RBP25.31■■□□□ 1.64
SEC23A-213ENST00000557280 RIOK1Q9BRS2 568 aaKnown RBP25.31■■□□□ 1.64
SEC23A-213ENST00000557280 FSD1Q9BTV5 496 aa25.31■■□□□ 1.64
SEC23A-213ENST00000557280 IDI2Q9BXS1 227 aa25.31■■□□□ 1.64
SEC23A-213ENST00000557280 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
SEC23A-213ENST00000557280 PPP2R3BQ9Y5P8 575 aa25.31■■□□□ 1.64
SEC23A-213ENST00000557280 CDK5RAP2Q96SN8 1893 aa25.3■■□□□ 1.64
SEC23A-213ENST00000557280 BAG3O95817 575 aa25.3■■□□□ 1.64
SEC23A-213ENST00000557280 GSPT1P15170 499 aaKnown RBP25.3■■□□□ 1.64
SEC23A-213ENST00000557280 UBE3CQ15386 1083 aa25.3■■□□□ 1.64
SEC23A-213ENST00000557280 FAM83AQ86UY5 434 aa25.3■■□□□ 1.64
SEC23A-213ENST00000557280 TEX11Q8IYF3 940 aa25.3■■□□□ 1.64
SEC23A-213ENST00000557280 NOL10Q9BSC4 688 aaKnown RBP25.3■■□□□ 1.64
SEC23A-213ENST00000557280 TNNI2P48788 182 aa25.29■■□□□ 1.64
SEC23A-213ENST00000557280 TMED8Q6PL24 325 aaPredicted RBP25.29■■□□□ 1.64
SEC23A-213ENST00000557280 LCORLQ8N3X6 602 aa25.29■■□□□ 1.64
SEC23A-213ENST00000557280 EVI5LQ96CN4 794 aa25.29■■□□□ 1.64
SEC23A-213ENST00000557280 MAGEB6P1A0A0J9YX57 407 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 TMEM88BA6NKF7 163 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 TRIM6-TRIM34B2RNG4 842 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 RNF113AO15541 343 aaKnown RBP25.28■■□□□ 1.64
SEC23A-213ENST00000557280 TTC22Q5TAA0 569 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 ZSCAN25Q6NSZ9 544 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 MOB2Q70IA6 237 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 SH3BP5LQ7L8J4 393 aa25.28■■□□□ 1.64
SEC23A-213ENST00000557280 PUS7LQ9H0K6 701 aaKnown RBP25.28■■□□□ 1.64
SEC23A-213ENST00000557280 RPAP1Q9BWH6 1393 aaPredicted RBP25.28■■□□□ 1.64
SEC23A-213ENST00000557280 MBD4O95243 580 aa25.27■■□□□ 1.64
SEC23A-213ENST00000557280 TGFBRAP1Q8WUH2 860 aa25.27■■□□□ 1.64
SEC23A-213ENST00000557280 FAM151AQ8WW52 585 aa25.27■■□□□ 1.64
SEC23A-213ENST00000557280 ARMT1Q9H993 441 aa25.27■■□□□ 1.64
SEC23A-213ENST00000557280 FOCADQ5VW36 1801 aa25.27■■□□□ 1.64
SEC23A-213ENST00000557280 PLCG2P16885 1265 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 PRKG1Q13976 671 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 MAPKAPK5Q8IW41 473 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 OSBP2Q969R2 916 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 RILPL2Q969X0 211 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 GBA2Q9HCG7 927 aaPredicted RBP25.26■■□□□ 1.63
SEC23A-213ENST00000557280 CREBZFQ9NS37 354 aa25.26■■□□□ 1.63
SEC23A-213ENST00000557280 PAPPA2Q9BXP8 1791 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms