RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 VSTM4Q8IW00 320 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 DSCC1Q9BVC3 393 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 CARD6Q9BX69 1037 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 FUT8Q9BYC5 575 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 TRIM34Q9BYJ4 488 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 MRFAP1Q9Y605 127 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
APEX1-216ENST00000557159 ZNF609O15014 1411 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 FAM237AA0A1B0GTK4 181 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 URI1O94763 535 aaPredicted RBP14.46□□□□□ -0.09
APEX1-216ENST00000557159 IVLP07476 585 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 CMA1P23946 247 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 NDUFA8P51970 172 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 CEBPZQ03701 1054 aaKnown RBP14.46□□□□□ -0.09
APEX1-216ENST00000557159 TUBB2AQ13885 445 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 COPS6Q7L5N1 327 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 ELOA2Q8IYF1 753 aaPredicted RBP14.46□□□□□ -0.09
APEX1-216ENST00000557159 NEK11Q8NG66 645 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 TUBB2BQ9BVA1 445 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 CCDC8Q9H0W5 538 aaPredicted RBP14.46□□□□□ -0.09
APEX1-216ENST00000557159 HSD3B7Q9H2F3 369 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 ATG3Q9NT62 314 aa14.46□□□□□ -0.09
APEX1-216ENST00000557159 VWA3AA6NCI4 1184 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 FANCGO15287 622 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
APEX1-216ENST00000557159 GCKRQ14397 625 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 CWF19L2Q2TBE0 894 aaKnown RBP14.45□□□□□ -0.1
APEX1-216ENST00000557159 TMEM139Q8IV31 216 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 XAGE3Q8WTP9 111 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 SUCLG2Q96I99 432 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 FTOQ9C0B1 505 aaKnown RBP eCLIP14.45□□□□□ -0.1
APEX1-216ENST00000557159 COPRSQ9NQ92 184 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 ASAP1Q9ULH1 1129 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 C5P01031 1676 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 NHSQ6T4R5 1651 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 PALLDQ8WX93 1383 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 NEURL1BA8MQ27 555 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 MYO1CO00159 1063 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 STX10O60499 249 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 ST5P78524 1137 aa14.45□□□□□ -0.1
APEX1-216ENST00000557159 BICC1Q9H694 974 aaKnown RBP14.45□□□□□ -0.1
APEX1-216ENST00000557159 TLR7Q9NYK1 1049 aaKnown RBP14.45□□□□□ -0.1
APEX1-216ENST00000557159 SPEF2Q9C093 1822 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 POLR3GO15318 223 aaPredicted RBP14.44□□□□□ -0.1
APEX1-216ENST00000557159 ZNF202O95125 648 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 IGKV5-2P06315 115 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 CASQ1P31415 396 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 ACTN2P35609 894 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 USP5P45974 858 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 MYL5Q02045 173 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
APEX1-216ENST00000557159 SRLQ86TD4 932 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 GOLGA1Q92805 767 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 HAUS7Q99871 368 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 HELLSQ9NRZ9 838 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 ADAM21Q9UKJ8 722 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 PPP2R2CQ9Y2T4 447 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.44□□□□□ -0.1
APEX1-216ENST00000557159 LAMB4A4D0S4 1761 aa14.44□□□□□ -0.1
APEX1-216ENST00000557159 A0A1B0GVL5 298 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 SPTLC2O15270 562 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 TUBBP07437 444 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 MYL6BP14649 208 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 TXLNAP40222 546 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 UBASH3AP57075 661 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 PPP2R3AQ06190 1150 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 STK38Q15208 465 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 STOX1Q6ZVD7 989 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 LRP10Q7Z4F1 713 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 PLBD2Q8NHP8 589 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 DDX60Q8IY21 1712 aaKnown RBP14.43□□□□□ -0.1
APEX1-216ENST00000557159 MAP3K15Q6ZN16 1313 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 SEC31AO94979 1220 aaKnown RBP14.43□□□□□ -0.1
APEX1-216ENST00000557159 PDIA3P30101 505 aaKnown RBP14.43□□□□□ -0.1
APEX1-216ENST00000557159 AXDND1Q5T1B0 1012 aaPredicted RBP14.43□□□□□ -0.1
APEX1-216ENST00000557159 CCDC191Q8NCU4 936 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 KIFC2Q96AC6 838 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 RAB21Q9UL25 225 aa14.43□□□□□ -0.1
APEX1-216ENST00000557159 TOP1P11387 765 aaKnown RBP14.42□□□□□ -0.1
APEX1-216ENST00000557159 NOP2P46087 812 aaKnown RBP14.42□□□□□ -0.1
APEX1-216ENST00000557159 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
APEX1-216ENST00000557159 UTP14AQ9BVJ6 771 aaKnown RBP14.42□□□□□ -0.1
APEX1-216ENST00000557159 PARD6BQ9BYG5 372 aa14.42□□□□□ -0.1
APEX1-216ENST00000557159 BTAF1O14981 1849 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 A0A087WWV3 80 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 PLSCR1O15162 318 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 DHX16O60231 1041 aaKnown RBP14.41□□□□□ -0.1
APEX1-216ENST00000557159 FDPSP14324 419 aaKnown RBP14.41□□□□□ -0.1
APEX1-216ENST00000557159 LONRF2Q1L5Z9 754 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 NOM1Q5C9Z4 860 aaKnown RBP14.41□□□□□ -0.1
APEX1-216ENST00000557159 GORABQ5T7V8 394 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 CCDC125Q86Z20 511 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 GOLGA6L1Q8N7Z2 621 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 KBTBD3Q8NAB2 608 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
APEX1-216ENST00000557159 MYD88Q99836 296 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 HPSEQ9Y251 543 aa14.41□□□□□ -0.1
APEX1-216ENST00000557159 PPP6R2O75170 966 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms