RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
CCDC175-205ENST00000556996 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
CCDC175-205ENST00000556996 CEP44Q9C0F1 390 aa11.94□□□□□ -0.5
CCDC175-205ENST00000556996 ACTL7BQ9Y614 415 aa11.94□□□□□ -0.5
CCDC175-205ENST00000556996 CTSHP09668 335 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 BMP6P22004 513 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 XPCQ01831 940 aaPredicted RBP11.93□□□□□ -0.5
CCDC175-205ENST00000556996 ZNF252P-AS1Q0IIN9 211 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 GRIN3AQ8TCU5 1115 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 KCNB2Q92953 911 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 C7orf69Q9H7B7 122 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 RAD18Q9NS91 495 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 AP4E1Q9UPM8 1137 aa11.93□□□□□ -0.5
CCDC175-205ENST00000556996 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
CCDC175-205ENST00000556996 CDPF1Q6NVV7 123 aa11.92□□□□□ -0.5
CCDC175-205ENST00000556996 TRIM42Q8IWZ5 723 aa11.92□□□□□ -0.5
CCDC175-205ENST00000556996 GIPC2Q8TF65 315 aa11.92□□□□□ -0.5
CCDC175-205ENST00000556996 HMX2A2RU54 273 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 FSTP19883 344 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
CCDC175-205ENST00000556996 BEND4Q6ZU67 534 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 KCNF1Q9H3M0 494 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 STOML1Q9UBI4 398 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 PCDHGC5Q9Y5F6 944 aa11.91□□□□□ -0.5
CCDC175-205ENST00000556996 MAP4P27816 1152 aaKnown RBP11.9□□□□□ -0.5
CCDC175-205ENST00000556996 FBLIM1Q8WUP2 373 aa11.9□□□□□ -0.5
CCDC175-205ENST00000556996 KRT82Q9NSB4 513 aa11.9□□□□□ -0.5
CCDC175-205ENST00000556996 FAM105AQ9NUU6 356 aa11.9□□□□□ -0.5
CCDC175-205ENST00000556996 HIF3AQ9Y2N7 669 aa11.9□□□□□ -0.5
CCDC175-205ENST00000556996 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
CCDC175-205ENST00000556996 KIF4BQ2VIQ3 1234 aa11.89□□□□□ -0.51
CCDC175-205ENST00000556996 PCNX4Q63HM2 1172 aa11.89□□□□□ -0.51
CCDC175-205ENST00000556996 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
CCDC175-205ENST00000556996 GPBAR1Q8TDU6 330 aa11.88□□□□□ -0.51
CCDC175-205ENST00000556996 RXRBP28702 533 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 CCDC85BQ15834 202 aaPredicted RBP11.87□□□□□ -0.51
CCDC175-205ENST00000556996 SV2BQ7L1I2 683 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 FAM83CQ9BQN1 747 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 EMILIN2Q9BXX0 1053 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 GSX1Q9H4S2 264 aaPredicted RBP11.87□□□□□ -0.51
CCDC175-205ENST00000556996 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
CCDC175-205ENST00000556996 RAB6AP20340 208 aa11.86□□□□□ -0.51
CCDC175-205ENST00000556996 USP11P51784 963 aa11.86□□□□□ -0.51
CCDC175-205ENST00000556996 CRIM1Q9NZV1 1036 aa11.86□□□□□ -0.51
CCDC175-205ENST00000556996 VTI1BQ9UEU0 232 aa11.86□□□□□ -0.51
CCDC175-205ENST00000556996 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
CCDC175-205ENST00000556996 SORBS3O60504 671 aa11.85□□□□□ -0.51
CCDC175-205ENST00000556996 LLGL2Q6P1M3 1020 aa11.85□□□□□ -0.51
CCDC175-205ENST00000556996 ASPAP45381 313 aa11.84□□□□□ -0.51
CCDC175-205ENST00000556996 ID3Q02535 119 aa11.84□□□□□ -0.51
CCDC175-205ENST00000556996 EZH1Q92800 747 aaPredicted RBP11.84□□□□□ -0.51
CCDC175-205ENST00000556996 CRELD1Q96HD1 420 aa11.84□□□□□ -0.51
CCDC175-205ENST00000556996 SAMM50Q9Y512 469 aa11.84□□□□□ -0.51
CCDC175-205ENST00000556996 IGLV1-40P01703 118 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 NFIAQ12857 509 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 MAP3K11Q16584 847 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 SHISA5Q8N114 240 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 ACSS3Q9H6R3 686 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 MRS2Q9HD23 443 aa11.83□□□□□ -0.52
CCDC175-205ENST00000556996 FAM95CA0A1B0GW59 222 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 NFICP08651 508 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 ZNF16P17020 682 aaPredicted RBP11.82□□□□□ -0.52
CCDC175-205ENST00000556996 PTPN11Q06124 597 aaPredicted RBP11.82□□□□□ -0.52
CCDC175-205ENST00000556996 TTBK2Q6IQ55 1244 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 GAL3ST3Q96A11 431 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 ACSBG1Q96GR2 724 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 SEMA6CQ9H3T2 930 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 DISC1Q9NRI5 854 aa11.82□□□□□ -0.52
CCDC175-205ENST00000556996 TRIM37O94972 964 aa11.81□□□□□ -0.52
CCDC175-205ENST00000556996 SLFN14P0C7P3 912 aa11.81□□□□□ -0.52
CCDC175-205ENST00000556996 TAF1CQ15572 869 aaPredicted RBP11.81□□□□□ -0.52
CCDC175-205ENST00000556996 USP31Q70CQ4 1352 aa11.8□□□□□ -0.52
CCDC175-205ENST00000556996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.8□□□□□ -0.52
CCDC175-205ENST00000556996 DYNC1LI2O43237 492 aaPredicted RBP11.8□□□□□ -0.52
CCDC175-205ENST00000556996 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
CCDC175-205ENST00000556996 ZNF326Q5BKZ1 582 aaKnown RBP11.8□□□□□ -0.52
CCDC175-205ENST00000556996 ZC3H12AQ5D1E8 599 aaKnown RBP11.8□□□□□ -0.52
CCDC175-205ENST00000556996 ZMYM1Q5SVZ6 1142 aa11.8□□□□□ -0.52
CCDC175-205ENST00000556996 MFSD14AQ96MC6 490 aa11.8□□□□□ -0.52
CCDC175-205ENST00000556996 CYP8B1Q9UNU6 501 aa11.8□□□□□ -0.52
CCDC175-205ENST00000556996 LIG3P49916 1009 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
CCDC175-205ENST00000556996 MRPL58Q14197 206 aaKnown RBP11.79□□□□□ -0.52
CCDC175-205ENST00000556996 LRRC14Q15048 493 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 ATXN3LQ9H3M9 355 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 PCDHB5Q9Y5E4 795 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 CSADQ9Y600 493 aa11.79□□□□□ -0.52
CCDC175-205ENST00000556996 F6X3S4 739 aa11.78□□□□□ -0.52
CCDC175-205ENST00000556996 NEFMP07197 916 aa11.78□□□□□ -0.52
CCDC175-205ENST00000556996 HCLS1P14317 486 aaPredicted RBP11.78□□□□□ -0.52
CCDC175-205ENST00000556996 TTLL4Q14679 1199 aa11.78□□□□□ -0.52
CCDC175-205ENST00000556996 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.78□□□□□ -0.52
CCDC175-205ENST00000556996 ZDHHC13Q8IUH4 622 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms