RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 AEBP2Q6ZN18 517 aaPredicted RBP38.88■■■■□ 3.81
CCDC175-205ENST00000556996 CHIC1Q5VXU3 224 aa37.76■■■■□ 3.64
CCDC175-205ENST00000556996 PHF23Q9BUL5 403 aaPredicted RBP33.28■■■□□ 2.92
CCDC175-205ENST00000556996 SENP3Q9H4L4 574 aaPredicted RBP32.85■■■□□ 2.85
CCDC175-205ENST00000556996 FOXD1Q16676 465 aa30.6■■■□□ 2.49
CCDC175-205ENST00000556996 PLPPR3Q6T4P5 718 aa30.56■■■□□ 2.48
CCDC175-205ENST00000556996 PPP6R1Q9UPN7 881 aa29.41■■■□□ 2.3
CCDC175-205ENST00000556996 ADRA2BP18089 450 aa29.36■■■□□ 2.29
CCDC175-205ENST00000556996 PIAS4Q8N2W9 510 aaPredicted RBP28.79■■■□□ 2.2
CCDC175-205ENST00000556996 MSH5O43196 834 aa28.13■■■□□ 2.09
CCDC175-205ENST00000556996 PPP4R3CPQ6ZMV5 832 aa26.97■■□□□ 1.91
CCDC175-205ENST00000556996 MAPK8IP2Q13387 824 aaPredicted RBP26.69■■□□□ 1.86
CCDC175-205ENST00000556996 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
CCDC175-205ENST00000556996 KCNA4P22459 653 aa26.29■■□□□ 1.8
CCDC175-205ENST00000556996 DMRT2Q9Y5R5 561 aa26.25■■□□□ 1.79
CCDC175-205ENST00000556996 CNKSR2Q8WXI2 1034 aa26.18■■□□□ 1.78
CCDC175-205ENST00000556996 NCBP3Q53F19 620 aaKnown RBP26.11■■□□□ 1.77
CCDC175-205ENST00000556996 POTEDQ86YR6 584 aa25.91■■□□□ 1.74
CCDC175-205ENST00000556996 NPM3O75607 178 aaKnown RBP25.88■■□□□ 1.73
CCDC175-205ENST00000556996 RNF216Q9NWF9 866 aaPredicted RBP25.7■■□□□ 1.7
CCDC175-205ENST00000556996 HOXD11P31277 338 aaPredicted RBP25.66■■□□□ 1.7
CCDC175-205ENST00000556996 DCAF8L1A6NGE4 600 aa25.11■■□□□ 1.61
CCDC175-205ENST00000556996 DNAJC5BQ9UF47 199 aa25.04■■□□□ 1.6
CCDC175-205ENST00000556996 SLC4A1APQ9BWU0 796 aaKnown RBP24.95■■□□□ 1.58
CCDC175-205ENST00000556996 SLC4A2P04920 1241 aa24.5■■□□□ 1.51
CCDC175-205ENST00000556996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.42■■□□□ 1.5
CCDC175-205ENST00000556996 ZBTB22O15209 634 aa24.25■■□□□ 1.47
CCDC175-205ENST00000556996 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
CCDC175-205ENST00000556996 RNF39Q9H2S5 420 aa24.17■■□□□ 1.46
CCDC175-205ENST00000556996 FOXD4L1Q9NU39 408 aa24.15■■□□□ 1.46
CCDC175-205ENST00000556996 U3KPZ7 1027 aaPredicted RBP24.11■■□□□ 1.45
CCDC175-205ENST00000556996 CSRNP3Q8WYN3 585 aa23.96■■□□□ 1.43
CCDC175-205ENST00000556996 MYCNP04198 464 aaPredicted RBP23.85■■□□□ 1.41
CCDC175-205ENST00000556996 C1QBPQ07021 282 aaKnown RBP23.8■■□□□ 1.4
CCDC175-205ENST00000556996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
CCDC175-205ENST00000556996 CACNB1Q02641 598 aaPredicted RBP23.58■■□□□ 1.37
CCDC175-205ENST00000556996 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
CCDC175-205ENST00000556996 SAMD1Q6SPF0 538 aaPredicted RBP23.54■■□□□ 1.36
CCDC175-205ENST00000556996 SPINK5Q9NQ38 1064 aaPredicted RBP23.49■■□□□ 1.35
CCDC175-205ENST00000556996 ATF5Q9Y2D1 282 aaPredicted RBP23.36■■□□□ 1.33
CCDC175-205ENST00000556996 APLP2Q06481 763 aa23.32■■□□□ 1.32
CCDC175-205ENST00000556996 CAPN15O75808 1086 aa23.31■■□□□ 1.32
CCDC175-205ENST00000556996 ATXN8OSP0DMR3 200 aa23.24■■□□□ 1.31
CCDC175-205ENST00000556996 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
CCDC175-205ENST00000556996 ZNF219Q9P2Y4 722 aaPredicted RBP23.12■■□□□ 1.29
CCDC175-205ENST00000556996 DSG3P32926 999 aa22.98■■□□□ 1.27
CCDC175-205ENST00000556996 ABCB7O75027 752 aa22.93■■□□□ 1.26
CCDC175-205ENST00000556996 POLA2Q14181 598 aa22.78■■□□□ 1.24
CCDC175-205ENST00000556996 MKRN4PQ13434 485 aaPredicted RBP22.32■■□□□ 1.16
CCDC175-205ENST00000556996 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
CCDC175-205ENST00000556996 FBLN2P98095 1184 aa22.2■■□□□ 1.14
CCDC175-205ENST00000556996 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
CCDC175-205ENST00000556996 RBM42Q9BTD8 480 aaKnown RBP21.79■■□□□ 1.08
CCDC175-205ENST00000556996 SPDYE2BA6NHP3 402 aa21.74■■□□□ 1.07
CCDC175-205ENST00000556996 SPDYE6P0CI01 402 aa21.74■■□□□ 1.07
CCDC175-205ENST00000556996 SPDYE2Q495Y8 402 aa21.74■■□□□ 1.07
CCDC175-205ENST00000556996 SPDYE4A6NLX3 237 aa21.67■■□□□ 1.06
CCDC175-205ENST00000556996 ZNF692Q9BU19 519 aaPredicted RBP21.65■■□□□ 1.06
CCDC175-205ENST00000556996 FKBP8Q14318 412 aa21.64■■□□□ 1.05
CCDC175-205ENST00000556996 SSUH2Q9Y2M2 353 aa21.63■■□□□ 1.05
CCDC175-205ENST00000556996 AKT1S1Q96B36 256 aa21.53■■□□□ 1.04
CCDC175-205ENST00000556996 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC175-205ENST00000556996 REM2Q8IYK8 340 aaPredicted RBP21.39■■□□□ 1.01
CCDC175-205ENST00000556996 PROM2Q8N271 834 aa21.34■■□□□ 1.01
CCDC175-205ENST00000556996 PITPNM1O00562 1244 aa21.18■□□□□ 0.98
CCDC175-205ENST00000556996 SPDYE1Q8NFV5 336 aaPredicted RBP21.12■□□□□ 0.97
CCDC175-205ENST00000556996 CLEC11AQ9Y240 323 aa21.07■□□□□ 0.96
CCDC175-205ENST00000556996 CHRDL2Q6WN34 429 aa21.01■□□□□ 0.95
CCDC175-205ENST00000556996 STAG3Q9UJ98 1225 aa20.9■□□□□ 0.94
CCDC175-205ENST00000556996 PRR29P0C7W0 189 aa20.83■□□□□ 0.93
CCDC175-205ENST00000556996 FXR2P51116 673 aaKnown RBP eCLIP20.76■□□□□ 0.91
CCDC175-205ENST00000556996 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
CCDC175-205ENST00000556996 PIP4P2Q8N4L2 257 aa20.75■□□□□ 0.91
CCDC175-205ENST00000556996 CHADLQ6NUI6 762 aa20.64■□□□□ 0.89
CCDC175-205ENST00000556996 CREBZFQ9NS37 354 aa20.63■□□□□ 0.89
CCDC175-205ENST00000556996 PRKAR2AP13861 404 aaKnown RBP20.61■□□□□ 0.89
CCDC175-205ENST00000556996 VASPP50552 380 aaPredicted RBP20.6■□□□□ 0.89
CCDC175-205ENST00000556996 MIER1Q8N108 512 aa20.52■□□□□ 0.88
CCDC175-205ENST00000556996 PLCD3Q8N3E9 789 aa20.48■□□□□ 0.87
CCDC175-205ENST00000556996 POTEHQ6S545 545 aa20.46■□□□□ 0.87
CCDC175-205ENST00000556996 MNX1P50219 401 aaPredicted RBP20.42■□□□□ 0.86
CCDC175-205ENST00000556996 FARP1Q9Y4F1 1045 aaPredicted RBP20.37■□□□□ 0.85
CCDC175-205ENST00000556996 IFNLR1Q8IU57 520 aaPredicted RBP20.35■□□□□ 0.85
CCDC175-205ENST00000556996 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
CCDC175-205ENST00000556996 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
CCDC175-205ENST00000556996 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
CCDC175-205ENST00000556996 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC175-205ENST00000556996 NUBP1P53384 320 aa20.09■□□□□ 0.81
CCDC175-205ENST00000556996 C19orf67A6NJJ6 358 aa20.06■□□□□ 0.8
CCDC175-205ENST00000556996 HAX1O00165 279 aa20.05■□□□□ 0.8
CCDC175-205ENST00000556996 RASEFQ8IZ41 740 aa20.05■□□□□ 0.8
CCDC175-205ENST00000556996 SPOCK2Q92563 424 aa20.05■□□□□ 0.8
CCDC175-205ENST00000556996 CD44P16070 742 aaKnown RBP20.01■□□□□ 0.79
CCDC175-205ENST00000556996 EVX2Q03828 476 aa20.01■□□□□ 0.79
CCDC175-205ENST00000556996 TSPYL2Q9H2G4 693 aaPredicted RBP19.93■□□□□ 0.78
CCDC175-205ENST00000556996 ZRANB1Q9UGI0 708 aa19.88■□□□□ 0.77
CCDC175-205ENST00000556996 FAM212AQ96EL1 285 aa19.85■□□□□ 0.77
CCDC175-205ENST00000556996 PAK3O75914 559 aaPredicted RBP19.83■□□□□ 0.77
CCDC175-205ENST00000556996 DCAF8Q5TAQ9 597 aa19.81■□□□□ 0.76
CCDC175-205ENST00000556996 CCDC61Q9Y6R9 512 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms