RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SPTBN5Q9NRC6 3674 aaKnown RBP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 SYN1P17600 705 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 ATP2B4P23634 1241 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 DLGAP5Q15398 846 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 E2F4Q16254 413 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 KCNV2Q8TDN2 545 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 DDX27Q96GQ7 796 aaKnown RBP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 DEFB118Q96PH6 123 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 CRISPLD2Q9H0B8 497 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 SEMA6BQ9H3T3 888 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 ELP3Q9H9T3 547 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 KIAA1468Q9P260 1216 aa7.59□□□□□ -1.19
ATXN3-245ENST00000556958 SEPT9Q9UHD8 586 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-245ENST00000556958 FOSL2P15408 326 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 FCGRTP55899 365 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 DACT2Q5SW24 774 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 C17orf99Q6UX52 265 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 MCM10Q7L590 875 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 FBXW7Q969H0 707 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 CSADQ9Y600 493 aa7.58□□□□□ -1.2
ATXN3-245ENST00000556958 COL1A1P02452 1464 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-245ENST00000556958 UBR2Q8IWV8 1755 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 ADCY3O60266 1144 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 MAP3K9P80192 1104 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 PPP1R15BQ5SWA1 713 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-245ENST00000556958 PPP1R18Q6NYC8 613 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 MTMR14Q8NCE2 650 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 IL27Q8NEV9 243 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 PXYLP1Q8TE99 480 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 ZBED3Q96IU2 234 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-245ENST00000556958 LBHD1Q9BQE6 289 aaPredicted RBP7.57□□□□□ -1.2
ATXN3-245ENST00000556958 COA1Q9GZY4 146 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 PCDHGA10Q9Y5H3 936 aa7.57□□□□□ -1.2
ATXN3-245ENST00000556958 ZNF804BA4D1E1 1349 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 XDHP47989 1333 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 BTBD19C9JJ37 291 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 PRKCZQ05513 592 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 TTLL5Q6EMB2 1281 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 KIAA0825Q8IV33 1275 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 ATXN2LQ8WWM7 1075 aaKnown RBP7.56□□□□□ -1.2
ATXN3-245ENST00000556958 MYLIPQ8WY64 445 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 PHACTR3Q96KR7 559 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 C11orf49Q9H6J7 331 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 PAK6Q9NQU5 681 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-245ENST00000556958 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-245ENST00000556958 MIS18AQ9NYP9 233 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 CPA4Q9UI42 421 aa7.56□□□□□ -1.2
ATXN3-245ENST00000556958 INHAP05111 366 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 PRKAR2BP31323 418 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 EIF4A1P60842 406 aaKnown RBP7.55□□□□□ -1.2
ATXN3-245ENST00000556958 TNFAIP1Q13829 316 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 RASA3Q14644 834 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 MFSD10Q14728 455 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-245ENST00000556958 COPS6Q7L5N1 327 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 ALYREFQ86V81 257 aaKnown RBP7.55□□□□□ -1.2
ATXN3-245ENST00000556958 FAM89AQ96GI7 184 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 P2RX7Q99572 595 aaKnown RBP7.55□□□□□ -1.2
ATXN3-245ENST00000556958 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 VEZTQ9HBM0 779 aa7.55□□□□□ -1.2
ATXN3-245ENST00000556958 DUOX1Q9NRD9 1551 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-245ENST00000556958 CTGFP29279 349 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 MDM2Q00987 491 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-245ENST00000556958 DCTN1Q14203 1278 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-245ENST00000556958 ERO1BQ86YB8 467 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 ADAMTS19Q8TE59 1207 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 DIS3LQ8TF46 1054 aaKnown RBP7.54□□□□□ -1.2
ATXN3-245ENST00000556958 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-245ENST00000556958 CACNA1AO00555 2505 aa7.54□□□□□ -1.2
ATXN3-245ENST00000556958 CLRN2A0PK11 232 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 SPDYE5A6NIY4 337 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
ATXN3-245ENST00000556958 FLT3LGP49771 235 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 MRPS5P82675 430 aaKnown RBP7.53□□□□□ -1.2
ATXN3-245ENST00000556958 SMAD3P84022 425 aaKnown RBP7.53□□□□□ -1.2
ATXN3-245ENST00000556958 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
ATXN3-245ENST00000556958 IRF5Q13568 498 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 VGLL4Q14135 290 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 CCDC152Q4G0S7 254 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 ANKRD23Q86SG2 305 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 ANKRD18AQ8IVF6 992 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 ASB2Q96Q27 587 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
ATXN3-245ENST00000556958 NUDCQ9Y266 331 aa7.53□□□□□ -1.2
ATXN3-245ENST00000556958 POLR2AP24928 1970 aaKnown RBP7.52□□□□□ -1.21
ATXN3-245ENST00000556958 PDHXO00330 501 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 ELNP15502 786 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 GTF2IP78347 998 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 PDIA6Q15084 440 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 LRP10Q7Z4F1 713 aa7.52□□□□□ -1.21
ATXN3-245ENST00000556958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
ATXN3-245ENST00000556958 XAGE3Q8WTP9 111 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms