RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 ACSS3Q9H6R3 686 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 PPP1R9AQ9ULJ8 1098 aa8.59□□□□□ -1.03
LINC00648-203ENST00000556923 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.58□□□□□ -1.04
LINC00648-203ENST00000556923 ADAMTS4O75173 837 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 LIG1P18858 919 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 ASPAP45381 313 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 GATA6Q92908 595 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 TBC1D32Q96NH3 1257 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 KRTAP4-8Q9BYQ9 185 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 TMEM39AQ9NV64 488 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
LINC00648-203ENST00000556923 TMPRSS2O15393 492 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 ZNF862O60290 1169 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 GSTP1P09211 210 aaKnown RBP8.57□□□□□ -1.04
LINC00648-203ENST00000556923 ZAR1Q86SH2 424 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 PDZD3Q86UT5 571 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 C3orf58Q8NDZ4 430 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 GIMAP7Q8NHV1 300 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 STK35Q8TDR2 534 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 OSBPL1AQ9BXW6 950 aa8.57□□□□□ -1.04
LINC00648-203ENST00000556923 PPP2R3AQ06190 1150 aa8.56□□□□□ -1.04
LINC00648-203ENST00000556923 MAP7Q14244 749 aa8.56□□□□□ -1.04
LINC00648-203ENST00000556923 FBF1Q8TES7 1133 aa8.56□□□□□ -1.04
LINC00648-203ENST00000556923 WWC3Q9ULE0 1092 aa8.56□□□□□ -1.04
LINC00648-203ENST00000556923 LEMD3Q9Y2U8 911 aa8.56□□□□□ -1.04
LINC00648-203ENST00000556923 FAM170BA6NMN3 283 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
LINC00648-203ENST00000556923 CPSF6Q16630 551 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00648-203ENST00000556923 SULF2Q8IWU5 870 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 KRT82Q9NSB4 513 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 CRIM1Q9NZV1 1036 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 PCDHGC5Q9Y5F6 944 aa8.55□□□□□ -1.04
LINC00648-203ENST00000556923 FOSL1P15407 271 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 KIF4BQ2VIQ3 1234 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 METTL22Q9BUU2 404 aaPredicted RBP8.54□□□□□ -1.04
LINC00648-203ENST00000556923 OSBPL7Q9BZF2 842 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 C1GALT1Q9NS00 363 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 DAGLAQ9Y4D2 1042 aa8.54□□□□□ -1.04
LINC00648-203ENST00000556923 GP2P55259 537 aaKnown RBP8.53□□□□□ -1.04
LINC00648-203ENST00000556923 ID3Q02535 119 aa8.53□□□□□ -1.04
LINC00648-203ENST00000556923 MSMPQ1L6U9 139 aa8.53□□□□□ -1.04
LINC00648-203ENST00000556923 ALG1LQ6GMV1 187 aa8.53□□□□□ -1.04
LINC00648-203ENST00000556923 KCNB2Q92953 911 aa8.53□□□□□ -1.04
LINC00648-203ENST00000556923 FANCD2OSQ96PS1 177 aa8.53□□□□□ -1.04
LINC00648-203ENST00000556923 OAS3Q9Y6K5 1087 aaKnown RBP8.53□□□□□ -1.04
LINC00648-203ENST00000556923 P4HBP07237 508 aaKnown RBP8.52□□□□□ -1.05
LINC00648-203ENST00000556923 SLFN14P0C7P3 912 aa8.52□□□□□ -1.05
LINC00648-203ENST00000556923 NME2P22392 152 aa8.52□□□□□ -1.05
LINC00648-203ENST00000556923 GSTT1P30711 240 aa8.52□□□□□ -1.05
LINC00648-203ENST00000556923 NECAB3Q96P71 396 aaPredicted RBP8.52□□□□□ -1.05
LINC00648-203ENST00000556923 SRCIN1Q9C0H9 1055 aa8.52□□□□□ -1.05
LINC00648-203ENST00000556923 LGR6Q9HBX8 967 aa8.52□□□□□ -1.05
LINC00648-203ENST00000556923 ARNTP27540 789 aa8.51□□□□□ -1.05
LINC00648-203ENST00000556923 TPTE2Q6XPS3 522 aa8.51□□□□□ -1.05
LINC00648-203ENST00000556923 ZNF765Q7L2R6 523 aa8.51□□□□□ -1.05
LINC00648-203ENST00000556923 ATXN3LQ9H3M9 355 aa8.51□□□□□ -1.05
LINC00648-203ENST00000556923 DISC1Q9NRI5 854 aa8.51□□□□□ -1.05
LINC00648-203ENST00000556923 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
LINC00648-203ENST00000556923 ENC1O14682 589 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 CYP26A1O43174 497 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 FBXO24O75426 580 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 ATP2B2Q01814 1243 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 ZNF252P-AS1Q0IIN9 211 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 MAP1SQ66K74 1059 aaPredicted RBP8.5□□□□□ -1.05
LINC00648-203ENST00000556923 PIDD1Q9HB75 910 aa8.5□□□□□ -1.05
LINC00648-203ENST00000556923 PAGE1O75459 146 aa8.49□□□□□ -1.05
LINC00648-203ENST00000556923 WNT11O96014 354 aa8.49□□□□□ -1.05
LINC00648-203ENST00000556923 HNRNPUQ00839 825 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00648-203ENST00000556923 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
LINC00648-203ENST00000556923 PPM1HQ9ULR3 514 aa8.49□□□□□ -1.05
LINC00648-203ENST00000556923 GIPC1O14908 333 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 BMP6P22004 513 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 TTLL4Q14679 1199 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 GPBAR1Q8TDU6 330 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 C12orf49Q9H741 205 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 CBX8Q9HC52 389 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 CACNA2D2Q9NY47 1150 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
LINC00648-203ENST00000556923 LDHBP07195 334 aaKnown RBP8.47□□□□□ -1.05
LINC00648-203ENST00000556923 HCLS1P14317 486 aaPredicted RBP8.47□□□□□ -1.05
LINC00648-203ENST00000556923 CYP27A1Q02318 531 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 CDK5R2Q13319 367 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 ZC3H12AQ5D1E8 599 aaKnown RBP8.47□□□□□ -1.05
LINC00648-203ENST00000556923 MCTP1Q6DN14 999 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
LINC00648-203ENST00000556923 GRIN3AQ8TCU5 1115 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 CEP44Q9C0F1 390 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 CCDC39Q9UFE4 941 aa8.47□□□□□ -1.05
LINC00648-203ENST00000556923 PRNPP04156 253 aa8.46□□□□□ -1.06
LINC00648-203ENST00000556923 NEFMP07197 916 aa8.46□□□□□ -1.06
LINC00648-203ENST00000556923 RASIP1Q5U651 963 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms