RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
SDR39U1-220ENST00000556548 FBXL16Q8N461 479 aa21.54■■□□□ 1.04
SDR39U1-220ENST00000556548 LLPHQ9BRT6 129 aaKnown RBP21.54■■□□□ 1.04
SDR39U1-220ENST00000556548 LEMD3Q9Y2U8 911 aa21.54■■□□□ 1.04
SDR39U1-220ENST00000556548 KDM4AO75164 1064 aa21.53■■□□□ 1.04
SDR39U1-220ENST00000556548 ZSCAN23Q3MJ62 389 aa21.53■■□□□ 1.04
SDR39U1-220ENST00000556548 MSL1Q68DK7 614 aa21.53■■□□□ 1.04
SDR39U1-220ENST00000556548 TMEM63CQ9P1W3 806 aa21.53■■□□□ 1.04
SDR39U1-220ENST00000556548 GOLGB1Q14789 3259 aaKnown RBP21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 UFL1O94874 794 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 RXRAP19793 462 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 AATFQ9NY61 560 aaKnown RBP eCLIP21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 HPS5Q9UPZ3 1129 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 ZMYM6O95789 1325 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 EVCP57679 992 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 GLIPR1L2Q4G1C9 344 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 AKNAD1Q5T1N1 836 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 MFSD6Q6ZSS7 791 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 ANGEL1Q9UNK9 670 aaKnown RBP21.52■■□□□ 1.04
SDR39U1-220ENST00000556548 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
SDR39U1-220ENST00000556548 FAM43AQ8N2R8 423 aa21.51■■□□□ 1.03
SDR39U1-220ENST00000556548 ZKSCAN3Q9BRR0 538 aa21.51■■□□□ 1.03
SDR39U1-220ENST00000556548 CACNA1SQ13698 1873 aa21.51■■□□□ 1.03
SDR39U1-220ENST00000556548 CYP2D7A0A087X1C5 515 aa21.51■■□□□ 1.03
SDR39U1-220ENST00000556548 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 MBD3O95983 291 aa21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 XRCC6P12956 609 aaKnown RBP eCLIP21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 GUCY1B3Q02153 619 aa21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 PPARAQ07869 468 aa21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 CCDC144CPQ8IYA2 1237 aa21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 TFIP11Q9UBB9 837 aaKnown RBP21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 TAOK2Q9UL54 1235 aa21.5■■□□□ 1.03
SDR39U1-220ENST00000556548 WDR19Q8NEZ3 1342 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 HMGN5P82970 282 aaKnown RBP21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 TMEM67Q5HYA8 995 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 NLGN1Q8N2Q7 840 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 MYL10Q9BUA6 226 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 GRIK5Q16478 980 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 ZNF804AQ7Z570 1209 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 DZIP1Q86YF9 867 aaKnown RBP21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 TMEM87AQ8NBN3 555 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 IGDCC4Q8TDY8 1250 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 GGA1Q9UJY5 639 aa21.49■■□□□ 1.03
SDR39U1-220ENST00000556548 IFIT3O14879 490 aaKnown RBP21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 PDIA4P13667 645 aaKnown RBP21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 FDPSP14324 419 aaKnown RBP21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 STAG1Q8WVM7 1258 aa21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 PANK2Q9BZ23 570 aa21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 PDS5AQ29RF7 1337 aaKnown RBP21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 SALL1Q9NSC2 1324 aa21.48■■□□□ 1.03
SDR39U1-220ENST00000556548 CPLX1O14810 134 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 BBOX1O75936 387 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 MMP10P09238 476 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 EVX2Q03828 476 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 POTEAQ6S8J7 498 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 MICU3Q86XE3 530 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 GRPEL1Q9HAV7 217 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 LY9Q9HBG7 655 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 HOXA10P31260 410 aaPredicted RBP21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 ADD1P35611 737 aaKnown RBP21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 OLFM4Q6UX06 510 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 KRT23Q9C075 422 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 CNNM2Q9H8M5 875 aa21.47■■□□□ 1.03
SDR39U1-220ENST00000556548 SYCE3A1L190 88 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 C6orf229H3BNL8 230 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 KRT85P78386 507 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 TMEM87BQ96K49 555 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 MYH13Q9UKX3 1938 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 METAP2P50579 478 aaKnown RBP eCLIP21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 RESTQ13127 1097 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 SLC4A8Q2Y0W8 1093 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 OTUD7BQ6GQQ9 843 aa21.46■■□□□ 1.03
SDR39U1-220ENST00000556548 LDHBP07195 334 aaKnown RBP21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 ATP2B4P23634 1241 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 APOA5Q6Q788 366 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 KLRG2A4D1S0 409 aaPredicted RBP21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 PPEF1O14829 653 aaPredicted RBP21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 DHX16O60231 1041 aaKnown RBP21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 PRDM1O75626 825 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 UBE2HP62256 183 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 DIXDC1Q155Q3 683 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 TTC6Q86TZ1 520 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 TBC1D16Q8TBP0 767 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 WDR66Q8TBY9 1149 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 BRIP1Q9BX63 1249 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 CD209Q9NNX6 404 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 KIF3AQ9Y496 699 aa21.45■■□□□ 1.02
SDR39U1-220ENST00000556548 USP17L12C9JPN9 530 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 USP17L21D6R901 530 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 MRE11P49959 708 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 SPTY2D1Q68D10 685 aaPredicted RBP21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 GJB4Q9NTQ9 266 aa21.44■■□□□ 1.02
SDR39U1-220ENST00000556548 ORC3Q9UBD5 711 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms