RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
LINC01550-206ENST00000556462 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
LINC01550-206ENST00000556462 MXD3Q9BW11 206 aa12.87□□□□□ -0.35
LINC01550-206ENST00000556462 UTRNP46939 3433 aa12.87□□□□□ -0.35
LINC01550-206ENST00000556462 CCDC88AQ3V6T2 1871 aa12.87□□□□□ -0.35
LINC01550-206ENST00000556462 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 CUL4AQ13619 759 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
LINC01550-206ENST00000556462 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
LINC01550-206ENST00000556462 TBC1D10CQ8IV04 446 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 LIMCH1Q9UPQ0 1083 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 MROH7-TTC4A0A0A0MT08 1334 aa12.86□□□□□ -0.35
LINC01550-206ENST00000556462 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 TDO2P48775 406 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 GIMAP6Q6P9H5 292 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 FOXD4L1Q9NU39 408 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 MAST2Q6P0Q8 1798 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 GAKO14976 1311 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 DACT2Q5SW24 774 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
LINC01550-206ENST00000556462 CRNKL1Q9BZJ0 848 aaKnown RBP12.85□□□□□ -0.35
LINC01550-206ENST00000556462 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
LINC01550-206ENST00000556462 MKRN1Q9UHC7 482 aaKnown RBP12.85□□□□□ -0.35
LINC01550-206ENST00000556462 BAG3O95817 575 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 FKBP1AP62942 108 aaKnown RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 CTDSPL2Q05D32 466 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 MB21D2Q8IYB1 491 aaPredicted RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 SH3RF3Q8TEJ3 882 aaPredicted RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 AGXT2Q9BYV1 514 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 INCENPQ9NQS7 918 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 ZNF277Q9NRM2 450 aaPredicted RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 SCN9AQ15858 1988 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 USP17L3A6NCW0 530 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 USP17L4A6NCW7 530 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 LARGE1O95461 756 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 ANKRD1Q15327 319 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 Q6ZUG5 572 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 USP17L1Q7RTZ2 530 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 LRRC2Q9BYS8 371 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 SPON1Q9HCB6 807 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
LINC01550-206ENST00000556462 TTF2Q9UNY4 1162 aaKnown RBP12.84□□□□□ -0.35
LINC01550-206ENST00000556462 BRCA1P38398 1863 aaKnown RBP12.83□□□□□ -0.36
LINC01550-206ENST00000556462 F8W031 263 aaPredicted RBP12.83□□□□□ -0.36
LINC01550-206ENST00000556462 BTDP43251 543 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 RHBDL3P58872 404 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 PPARAQ07869 468 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 ME3Q16798 604 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 CHST3Q7LGC8 479 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 FBXL16Q8N461 479 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 DAGLAQ9Y4D2 1042 aa12.83□□□□□ -0.36
LINC01550-206ENST00000556462 MYH2Q9UKX2 1941 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 USP17L12C9JPN9 530 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 USP17L21D6R901 530 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 ANTXR2P58335 489 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
LINC01550-206ENST00000556462 ZSCAN31Q96LW9 406 aaPredicted RBP12.82□□□□□ -0.36
LINC01550-206ENST00000556462 NEDD4P46934 1319 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 LAMA4Q16363 1823 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 CYP2D7A0A087X1C5 515 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 MINDY4BA8MYZ0 360 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 MCM5P33992 734 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 TRDNQ13061 729 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 RALYLQ86SE5 291 aaKnown RBP12.82□□□□□ -0.36
LINC01550-206ENST00000556462 NOL10Q9BSC4 688 aaKnown RBP12.82□□□□□ -0.36
LINC01550-206ENST00000556462 MRIQ9BWK5 157 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 BCS1LQ9Y276 419 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 COL4A5P29400 1685 aa12.82□□□□□ -0.36
LINC01550-206ENST00000556462 B4E1Z4 1266 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 NFKBIEO00221 500 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 SCNN1DP51172 638 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 EVX2Q03828 476 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 HHIPL2Q6UWX4 724 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 MFSD6Q6ZSS7 791 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 CYB5R4Q7L1T6 521 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 TGFBRAP1Q8WUH2 860 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 BRF1Q92994 677 aa12.81□□□□□ -0.36
LINC01550-206ENST00000556462 SH2B1Q9NRF2 756 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms