RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 SH2B2O14492 632 aaPredicted RBP11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 CPLX1O14810 134 aa11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 SPTY2D1Q68D10 685 aaPredicted RBP11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 STAG1Q8WVM7 1258 aa11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 RIOK1Q9BRS2 568 aaKnown RBP11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 NEDD4P46934 1319 aa11.84□□□□□ -0.51
EFCAB11-209ENST00000556005 TNRC6CQ9HCJ0 1690 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 BBOX1O75936 387 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 APBA3O96018 575 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 TXNRD3Q86VQ6 643 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 IGDCC4Q8TDY8 1250 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 MTA3Q9BTC8 594 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 ZSWIM5Q9P217 1185 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 HPS5Q9UPZ3 1129 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 ELP1O95163 1332 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 IRS2Q9Y4H2 1338 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 KDM4AO75164 1064 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 LIFRP42702 1097 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 MECOMQ03112 1051 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 PPARAQ07869 468 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 CHAF1AQ13111 956 aaPredicted RBP11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 SART3Q15020 963 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 SGMS1Q86VZ5 419 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 SDR42E1Q8WUS8 393 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 CFAP45Q9UL16 551 aa11.83□□□□□ -0.52
EFCAB11-209ENST00000556005 TCHHQ07283 1943 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 CDKL5O76039 1030 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 LETM1O95202 739 aaPredicted RBP11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 RXRBP28702 533 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 HOXA10P31260 410 aaPredicted RBP11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 DDR1Q08345 913 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 RESTQ13127 1097 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 CPLX2Q6PUV4 134 aaKnown RBP11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 LRSAM1Q6UWE0 723 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 NFXL1Q6ZNB6 911 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 TMTC2Q8N394 836 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 TOMM22Q9NS69 142 aa11.82□□□□□ -0.52
EFCAB11-209ENST00000556005 ERICH2A1L162 156 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 SYCE3A1L190 88 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 KLRG2A4D1S0 409 aaPredicted RBP11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 MINDY4BA8MYZ0 360 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 FDPSP14324 419 aaKnown RBP11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 SYNE3Q6ZMZ3 975 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 TDRD7Q8NHU6 1098 aaKnown RBP11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 CRAMP1Q96RY5 1269 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 INCENPQ9NQS7 918 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
EFCAB11-209ENST00000556005 CCDC69A6NI79 296 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 ZBTB43O43298 467 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 PCP11498 1178 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 PRDX5P30044 214 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 DYNLL1P63167 89 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 GPSM2P81274 684 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 RRP12Q5JTH9 1297 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 CCDC183Q5T5S1 534 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 ATL3Q6DD88 541 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 FAM173BQ6P4H8 233 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 TMC4Q7Z404 712 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 CRNKL1Q9BZJ0 848 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 LY9Q9HBG7 655 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 ORC3Q9UBD5 711 aaPredicted RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 GGA1Q9UJY5 639 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 UFL1O94874 794 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 ESR2Q92731 530 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 AATFQ9NY61 560 aaKnown RBP eCLIP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 TFIP11Q9UBB9 837 aaKnown RBP11.8□□□□□ -0.52
EFCAB11-209ENST00000556005 LDHBP07195 334 aaKnown RBP11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 GSTO1P78417 241 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 WTAPQ15007 396 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 ZNF827Q17R98 1081 aa11.79□□□□□ -0.52
EFCAB11-209ENST00000556005 COL23A1Q86Y22 540 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms