RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 YEATS4O95619 227 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 STARD3NLO95772 234 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 FGAP02671 866 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 ADORA1P30542 326 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 LRMPQ12912 555 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 TPD52L1Q16890 204 aaPredicted RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 ENGASEQ8NFI3 743 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 C16orf45Q96MC5 204 aaPredicted RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 PLA2G12BQ9BX93 195 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 ORC3Q9UBD5 711 aaPredicted RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 NRBP1Q9UHY1 535 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 PAXBP1Q9Y5B6 917 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 MYH3P11055 1940 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 DDX60Q8IY21 1712 aaKnown RBP8.14□□□□□ -1.11
TDP1-213ENST00000555880 GPAA1O43292 621 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 ZAP70P43403 619 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 DHX8Q14562 1220 aaKnown RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 HSP90AB3PQ58FF7 597 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 CPLX2Q6PUV4 134 aaKnown RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 MB21D2Q8IYB1 491 aaPredicted RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 RGS22Q8NE09 1264 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 FBXO18Q8NFZ0 1043 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 TMC2Q8TDI7 906 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 FAM89AQ96GI7 184 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 ARID3AQ99856 593 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 PCDHA7Q9UN72 937 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 CDHR2Q9BYE9 1310 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 SPTLC2O15270 562 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 NRDCO43847 1150 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 TNNT1P13805 278 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 FDPSP14324 419 aaKnown RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 GSDMDP57764 484 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 LDHAL6AQ6ZMR3 332 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 LRRC8AQ8IWT6 810 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 FMR1NBQ8N0W7 255 aaPredicted RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 PDCL2Q8N4E4 241 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 AOPEPQ8N6M6 819 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 JMYQ8N9B5 988 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 LINC00301Q8NCQ3 95 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 CACTINQ8WUQ7 758 aaKnown RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 CCDC85AQ96PX6 553 aaPredicted RBP8.13□□□□□ -1.11
TDP1-213ENST00000555880 BCL2L12Q9HB09 334 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 CNNM1Q9NRU3 951 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 TBC1D2BQ9UPU7 963 aa8.13□□□□□ -1.11
TDP1-213ENST00000555880 ABCA3Q99758 1704 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 TOGARAM1Q9Y4F4 1720 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 A0A1B0GVL5 298 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 ANKRD18BA2A2Z9 1011 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 APPP05067 770 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 CSF1RP07333 972 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 MYSM1Q5VVJ2 828 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 DHX40Q8IX18 779 aaKnown RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 CCDC112Q8NEF3 446 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 TSC1Q92574 1164 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 ZNF512BQ96KM6 892 aaPredicted RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 PUS7LQ9H0K6 701 aaKnown RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 XIRP1Q702N8 1843 aaKnown RBP8.12□□□□□ -1.11
TDP1-213ENST00000555880 ANKRD36CQ5JPF3 1778 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 C4AP0C0L4 1744 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 C4BP0C0L5 1744 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 ATRNO75882 1429 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 RIC1Q4ADV7 1423 aa8.12□□□□□ -1.11
TDP1-213ENST00000555880 ZMYM6O95789 1325 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 MAP3K15Q6ZN16 1313 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 FOXP2O15409 715 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CTIFO43310 598 aaKnown RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 SKILP12757 684 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 ITGA6P23229 1130 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 METAP2P50579 478 aaKnown RBP eCLIP8.11□□□□□ -1.11
TDP1-213ENST00000555880 NDUFA8P51970 172 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 RBM6P78332 1123 aaKnown RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 TRIM29Q14134 588 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 SCARF1Q14162 830 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 SYCP1Q15431 976 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CCDC144BQ3MJ40 725 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 SLC9C2Q5TAH2 1124 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 ANO1Q5XXA6 986 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 FILIP1Q7Z7B0 1213 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 BPIFA3Q9BQP9 254 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
TDP1-213ENST00000555880 BTG4Q9NY30 223 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 KIAA1468Q9P260 1216 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 HPS5Q9UPZ3 1129 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CLIC4Q9Y696 253 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 AKAP11Q9UKA4 1901 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 CCDC69A6NI79 296 aa8.11□□□□□ -1.11
TDP1-213ENST00000555880 KIF2AO00139 706 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms