RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 LDHDQ86WU2 507 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 APPBP2Q92624 585 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
CHD8-208ENST00000555301 TMOD2Q9NZR1 351 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 PGAP2Q9UHJ9 254 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
CHD8-208ENST00000555301 KIF3CO14782 793 aa17.22■□□□□ 0.35
CHD8-208ENST00000555301 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
CHD8-208ENST00000555301 USP40Q9NVE5 1235 aa17.22■□□□□ 0.35
CHD8-208ENST00000555301 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHD8-208ENST00000555301 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
CHD8-208ENST00000555301 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
CHD8-208ENST00000555301 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
CHD8-208ENST00000555301 CDC42EP5Q6NZY7 148 aa17.21■□□□□ 0.35
CHD8-208ENST00000555301 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
CHD8-208ENST00000555301 MIGA1Q8NAN2 632 aa17.21■□□□□ 0.35
CHD8-208ENST00000555301 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
CHD8-208ENST00000555301 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
CHD8-208ENST00000555301 ZNF70Q9UC06 446 aaPredicted RBP17.21■□□□□ 0.35
CHD8-208ENST00000555301 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 CHGBP05060 677 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 RHBDL3P58872 404 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 ZMYM1Q5SVZ6 1142 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 FKBP1CQ5VVH2 108 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 AIDAQ96BJ3 306 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 RIOK1Q9BRS2 568 aaKnown RBP17.2■□□□□ 0.34
CHD8-208ENST00000555301 VEZTQ9HBM0 779 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 DIAPH3Q9NSV4 1193 aa17.2■□□□□ 0.34
CHD8-208ENST00000555301 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
CHD8-208ENST00000555301 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 TNNI2P48788 182 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
CHD8-208ENST00000555301 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 TEX11Q8IYF3 940 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 OSBP2Q969R2 916 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 IDI2Q9BXS1 227 aa17.19■□□□□ 0.34
CHD8-208ENST00000555301 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
CHD8-208ENST00000555301 TOMM70O94826 608 aa17.18■□□□□ 0.34
CHD8-208ENST00000555301 MBD4O95243 580 aa17.18■□□□□ 0.34
CHD8-208ENST00000555301 CHADLQ6NUI6 762 aa17.18■□□□□ 0.34
CHD8-208ENST00000555301 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
CHD8-208ENST00000555301 SH3RF3Q8TEJ3 882 aaPredicted RBP17.18■□□□□ 0.34
CHD8-208ENST00000555301 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
CHD8-208ENST00000555301 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
CHD8-208ENST00000555301 WDHD1O75717 1129 aaPredicted RBP17.17■□□□□ 0.34
CHD8-208ENST00000555301 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
CHD8-208ENST00000555301 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
CHD8-208ENST00000555301 FAM83AQ86UY5 434 aa17.17■□□□□ 0.34
CHD8-208ENST00000555301 LCORLQ8N3X6 602 aa17.17■□□□□ 0.34
CHD8-208ENST00000555301 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
CHD8-208ENST00000555301 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
CHD8-208ENST00000555301 PPP2R3BQ9Y5P8 575 aa17.17■□□□□ 0.34
CHD8-208ENST00000555301 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 GPAA1O43292 621 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 ENTPD3O75355 529 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 GNAT2P19087 354 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 CHMLP26374 656 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 CACNB3P54284 484 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
CHD8-208ENST00000555301 MAP1SQ66K74 1059 aaPredicted RBP17.16■□□□□ 0.34
CHD8-208ENST00000555301 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 SMC1BQ8NDV3 1235 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 STRBPQ96SI9 672 aaKnown RBP17.16■□□□□ 0.34
CHD8-208ENST00000555301 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 ARMT1Q9H993 441 aa17.16■□□□□ 0.34
CHD8-208ENST00000555301 A0A0D9SFI3 127 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 M0R2C6 588 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 USP5P45974 858 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 NFIAQ12857 509 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 RASA3Q14644 834 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 CASC1Q6TDU7 716 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
CHD8-208ENST00000555301 TGFBRAP1Q8WUH2 860 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 FAM151AQ8WW52 585 aa17.15■□□□□ 0.34
CHD8-208ENST00000555301 SEC62Q99442 399 aaKnown RBP17.15■□□□□ 0.34
CHD8-208ENST00000555301 CDC45O75419 566 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 PICALMQ13492 652 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 DDRGK1Q96HY6 314 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 FAM198AQ9UFP1 575 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 ADAMTSL1Q8N6G6 1762 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 RAD50Q92878 1312 aa17.14■□□□□ 0.33
CHD8-208ENST00000555301 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
CHD8-208ENST00000555301 TCP10Q12799 353 aa17.13■□□□□ 0.33
CHD8-208ENST00000555301 FSTL1Q12841 308 aa17.13■□□□□ 0.33
CHD8-208ENST00000555301 MAPKAPK5Q8IW41 473 aa17.13■□□□□ 0.33
CHD8-208ENST00000555301 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
CHD8-208ENST00000555301 DDX4Q9NQI0 724 aaKnown RBP17.13■□□□□ 0.33
CHD8-208ENST00000555301 FLT1P17948 1338 aa17.13■□□□□ 0.33
CHD8-208ENST00000555301 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
CHD8-208ENST00000555301 MYH2Q9UKX2 1941 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms