RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 PUS7LQ9H0K6 701 aaKnown RBP17.86■□□□□ 0.45
PSMA6-208ENST00000554843 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.45
PSMA6-208ENST00000554843 MAGEB6P1A0A0J9YX57 407 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 M0R2C6 588 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 WNT10BO00744 389 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 MBD4O95243 580 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 MCMDC2Q4G0Z9 681 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 FOCADQ5VW36 1801 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
PSMA6-208ENST00000554843 SAMD7Q7Z3H4 446 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 TRPM4Q8TD43 1214 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 AIDAQ96BJ3 306 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 PCDHAC2Q9Y5I4 1007 aa17.85■□□□□ 0.45
PSMA6-208ENST00000554843 POTECB2RU33 542 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 GPAA1O43292 621 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 EGFRP00533 1210 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 EPHX2P34913 555 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 RHBDL3P58872 404 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 TBC1D10BQ4KMP7 808 aaPredicted RBP17.84■□□□□ 0.45
PSMA6-208ENST00000554843 USP50Q70EL3 339 aaPredicted RBP17.84■□□□□ 0.45
PSMA6-208ENST00000554843 PRMT6Q96LA8 375 aaPredicted RBP17.84■□□□□ 0.45
PSMA6-208ENST00000554843 SEC62Q99442 399 aaKnown RBP17.84■□□□□ 0.45
PSMA6-208ENST00000554843 TAF1DQ9H5J8 278 aaPredicted RBP17.84■□□□□ 0.45
PSMA6-208ENST00000554843 CDK5RAP2Q96SN8 1893 aa17.84■□□□□ 0.45
PSMA6-208ENST00000554843 CCDC171Q6TFL3 1326 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 SGSM2O43147 1006 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 MYO1BO43795 1136 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 DYNLL1P63167 89 aaKnown RBP17.83■□□□□ 0.44
PSMA6-208ENST00000554843 SPDYE2Q495Y8 402 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 CDC42EP5Q6NZY7 148 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 LCORLQ8N3X6 602 aa17.83■□□□□ 0.44
PSMA6-208ENST00000554843 DDX60LQ5H9U9 1706 aaKnown RBP17.83■□□□□ 0.44
PSMA6-208ENST00000554843 RPAP1Q9BWH6 1393 aaPredicted RBP17.82■□□□□ 0.44
PSMA6-208ENST00000554843 VEGFAP15692 232 aaPredicted RBP17.82■□□□□ 0.44
PSMA6-208ENST00000554843 MFAP1P55081 439 aaKnown RBP17.82■□□□□ 0.44
PSMA6-208ENST00000554843 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
PSMA6-208ENST00000554843 STRBPQ96SI9 672 aaKnown RBP17.82■□□□□ 0.44
PSMA6-208ENST00000554843 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
PSMA6-208ENST00000554843 IL25Q9H293 177 aa17.82■□□□□ 0.44
PSMA6-208ENST00000554843 ARMT1Q9H993 441 aa17.82■□□□□ 0.44
PSMA6-208ENST00000554843 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
PSMA6-208ENST00000554843 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
PSMA6-208ENST00000554843 NPM3O75607 178 aaKnown RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 GNAT2P19087 354 aa17.81■□□□□ 0.44
PSMA6-208ENST00000554843 HIRAP54198 1017 aaPredicted RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
PSMA6-208ENST00000554843 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 FKBP1CQ5VVH2 108 aa17.81■□□□□ 0.44
PSMA6-208ENST00000554843 PNMA8AQ86V59 439 aaPredicted RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 SH3RF3Q8TEJ3 882 aaPredicted RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 IDI2Q9BXS1 227 aa17.81■□□□□ 0.44
PSMA6-208ENST00000554843 CRNKL1Q9BZJ0 848 aaKnown RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 COL2A1P02458 1487 aaPredicted RBP17.81■□□□□ 0.44
PSMA6-208ENST00000554843 PITPNM2Q9BZ72 1349 aa17.8■□□□□ 0.44
PSMA6-208ENST00000554843 WDHD1O75717 1129 aaPredicted RBP17.8■□□□□ 0.44
PSMA6-208ENST00000554843 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
PSMA6-208ENST00000554843 TEX11Q8IYF3 940 aa17.8■□□□□ 0.44
PSMA6-208ENST00000554843 ZC3H15Q8WU90 426 aaKnown RBP17.8■□□□□ 0.44
PSMA6-208ENST00000554843 TDRD3Q9H7E2 651 aaKnown RBP17.8■□□□□ 0.44
PSMA6-208ENST00000554843 NMRK2Q9NPI5 230 aa17.8■□□□□ 0.44
PSMA6-208ENST00000554843 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
PSMA6-208ENST00000554843 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
PSMA6-208ENST00000554843 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
PSMA6-208ENST00000554843 GGA3Q9NZ52 723 aa17.79■□□□□ 0.44
PSMA6-208ENST00000554843 ZMYM6O95789 1325 aa17.78■□□□□ 0.44
PSMA6-208ENST00000554843 CLRN2A0PK11 232 aa17.78■□□□□ 0.44
PSMA6-208ENST00000554843 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
PSMA6-208ENST00000554843 APOBEC3FQ8IUX4 373 aaKnown RBP17.78■□□□□ 0.44
PSMA6-208ENST00000554843 ZNF526Q8TF50 670 aaPredicted RBP17.78■□□□□ 0.44
PSMA6-208ENST00000554843 PGAP2Q9UHJ9 254 aa17.78■□□□□ 0.44
PSMA6-208ENST00000554843 SLC4A4Q9Y6R1 1079 aa17.78■□□□□ 0.44
PSMA6-208ENST00000554843 ASTN2O75129 1339 aaPredicted RBP17.77■□□□□ 0.44
PSMA6-208ENST00000554843 FLT1P17948 1338 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 FOXP2O15409 715 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 ENTPD3O75355 529 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 NFIAQ12857 509 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 TNFAIP1Q13829 316 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 ANGEL2Q5VTE6 544 aaKnown RBP17.77■□□□□ 0.44
PSMA6-208ENST00000554843 GIMAP6Q6P9H5 292 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 FAM83AQ86UY5 434 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 DSCC1Q9BVC3 393 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 VEZTQ9HBM0 779 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 ATP8A2Q9NTI2 1148 aa17.77■□□□□ 0.44
PSMA6-208ENST00000554843 MKRN1Q9UHC7 482 aaKnown RBP17.77■□□□□ 0.44
PSMA6-208ENST00000554843 LAMB1P07942 1786 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 GSG1L2A8MUP6 293 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 PRKAB2O43741 272 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 HSPD1P10809 573 aaKnown RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 USP5P45974 858 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 TNNI2P48788 182 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 CACNB3P54284 484 aa17.76■□□□□ 0.43
PSMA6-208ENST00000554843 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 GPBP1L1Q9HC44 474 aaPredicted RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 EPB41L4AQ9HCS5 686 aaPredicted RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 DDX4Q9NQI0 724 aaKnown RBP17.76■□□□□ 0.43
PSMA6-208ENST00000554843 FAM198AQ9UFP1 575 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms