RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 HIF3AQ9Y2N7 669 aa6.91□□□□□ -1.3
SCFD1-214ENST00000554819 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
SCFD1-214ENST00000554819 AOC2O75106 756 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 TIAF1O95411 115 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 CTSHP09668 335 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 NKAPLQ5M9Q1 402 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 PDZD3Q86UT5 571 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 RGS22Q8NE09 1264 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 MYRFLQ96LU7 910 aa6.9□□□□□ -1.3
SCFD1-214ENST00000554819 NOC4LQ9BVI4 516 aaKnown RBP6.9□□□□□ -1.3
SCFD1-214ENST00000554819 CCDC86Q9H6F5 360 aaKnown RBP6.9□□□□□ -1.3
SCFD1-214ENST00000554819 PAGE1O75459 146 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 CELA3AP09093 270 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 FURINP09958 794 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 LIG1P18858 919 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 PREPP48147 710 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 USP11P51784 963 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 ZNF252P-AS1Q0IIN9 211 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 RSPO4Q2I0M5 234 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-214ENST00000554819 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 MEI1Q5TIA1 1274 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 PCNX4Q63HM2 1172 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 MAP1SQ66K74 1059 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-214ENST00000554819 LLGL2Q6P1M3 1020 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 PRR23CQ6ZRP0 262 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-214ENST00000554819 ARMC10Q8N2F6 343 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 WDR18Q9BV38 432 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 YIPF2Q9BWQ6 316 aa6.89□□□□□ -1.31
SCFD1-214ENST00000554819 TRIM37O94972 964 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 ADH5P11766 374 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 DRD2P14416 443 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 LMNB1P20700 586 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 RPS26P62854 115 aaKnown RBP6.88□□□□□ -1.31
SCFD1-214ENST00000554819 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
SCFD1-214ENST00000554819 KIF4BQ2VIQ3 1234 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 STOML1Q9UBI4 398 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 RAXQ9Y2V3 346 aa6.88□□□□□ -1.31
SCFD1-214ENST00000554819 ZNF862O60290 1169 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 BMP3P12645 472 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 SLC51AQ86UW1 340 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 CLEC10AQ8IUN9 316 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 FAM20CQ8IXL6 584 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 C2CD4AQ8NCU7 369 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-214ENST00000554819 WDR89Q96FK6 387 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-214ENST00000554819 ACSBG1Q96GR2 724 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 AP4E1Q9UPM8 1137 aa6.87□□□□□ -1.31
SCFD1-214ENST00000554819 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-214ENST00000554819 DYRK3O43781 588 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 ID3Q02535 119 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 DYMQ7RTS9 669 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 GRIN3AQ8TCU5 1115 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 GPBAR1Q8TDU6 330 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 CACNA2D2Q9NY47 1150 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 PODXL2Q9NZ53 605 aa6.86□□□□□ -1.31
SCFD1-214ENST00000554819 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-214ENST00000554819 RXRBP28702 533 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 ASPAP45381 313 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 LIG3P49916 1009 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 PWP1Q13610 501 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
SCFD1-214ENST00000554819 BEND4Q6ZU67 534 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 FAM83CQ9BQN1 747 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 ATXN3LQ9H3M9 355 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 GSX1Q9H4S2 264 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-214ENST00000554819 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 PPP1R9AQ9ULJ8 1098 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 ACTL7BQ9Y614 415 aa6.85□□□□□ -1.31
SCFD1-214ENST00000554819 TMPRSS2O15393 492 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 GSC2O15499 205 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 MAP4P27816 1152 aaKnown RBP6.84□□□□□ -1.31
SCFD1-214ENST00000554819 MAP3K11Q16584 847 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 AGMOQ6ZNB7 445 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 RELL1Q8IUW5 271 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 TMEM87AQ8NBN3 555 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 PCDHA4Q9UN74 947 aa6.84□□□□□ -1.31
SCFD1-214ENST00000554819 FAM95CA0A1B0GW59 222 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 ADAM23O75077 832 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 VAMP1P23763 118 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 MAP7Q14244 749 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 SGO2Q562F6 1265 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
SCFD1-214ENST00000554819 RASIP1Q5U651 963 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 FBLIM1Q8WUP2 373 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 EZH1Q92800 747 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-214ENST00000554819 FANCD2OSQ96PS1 177 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 RSRP1Q9BUV0 290 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 PIDD1Q9HB75 910 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 PCDHGC5Q9Y5F6 944 aa6.83□□□□□ -1.32
SCFD1-214ENST00000554819 ERVK-24P63145 666 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 NFKBIBQ15653 356 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 PAOXQ6QHF9 649 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
SCFD1-214ENST00000554819 BACH2Q9BYV9 841 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms