RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-203ENST00000554514 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
ARHGEF40-203ENST00000554514 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
ARHGEF40-203ENST00000554514 NAPBQ9H115 298 aa18.2■□□□□ 0.5
ARHGEF40-203ENST00000554514 A0A1W2PQ27 194 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 A0A1W2PQ64 194 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 A0A1W2PQD8 194 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 ZBTB43O43298 467 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 PRKAB2O43741 272 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 SKILP12757 684 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 GTF2F1P35269 517 aaKnown RBP eCLIP18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 PDE4CQ08493 712 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 UBE3CQ15386 1083 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 MRFAP1L1Q96HT8 127 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 CDC25BP30305 580 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 STRBPQ96SI9 672 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 MYH7P12883 1935 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 AKAP11Q9UKA4 1901 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 EXOC5O00471 708 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 RASGRF1Q13972 1273 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 MIGA1Q8NAN2 632 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 LPIN2Q92539 896 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 CLIC6Q96NY7 704 aa18.19■□□□□ 0.5
ARHGEF40-203ENST00000554514 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 EPB41L4AQ9HCS5 686 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 ABCC12Q96J65 1359 aa18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 SUSD4Q5VX71 490 aa18.18■□□□□ 0.5
ARHGEF40-203ENST00000554514 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 SLC5A1P13866 664 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 AXDND1Q5T1B0 1012 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 IFNL3Q8IZI9 196 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 IFNKQ9P0W0 207 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 ZSWIM5Q9P217 1185 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 RANBP6O60518 1105 aaKnown RBP18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 ARID4AP29374 1257 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 BCAMP50895 628 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 TRIM29Q14134 588 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 SPECC1Q5M775 1068 aa18.17■□□□□ 0.5
ARHGEF40-203ENST00000554514 CDKL5O76039 1030 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 TDO2P48775 406 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 MAP3K12Q12852 859 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 SLC12A7Q9Y666 1083 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 ABCA3Q99758 1704 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 LMOD1P29536 600 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 SYKP43405 635 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 NAA30Q147X3 362 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 IGDCC4Q8TDY8 1250 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 XPO4Q9C0E2 1151 aaKnown RBP18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 BCL9O00512 1426 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 TMC6Q7Z403 805 aa18.16■□□□□ 0.5
ARHGEF40-203ENST00000554514 ITGB4P16144 1822 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 ATP2B1P20020 1258 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 SLC39A14Q15043 492 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 PPP4R3BQ5MIZ7 849 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 PRDM10Q9NQV6 1147 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 CMA1P23946 247 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 PNOCQ13519 176 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 PTPN21Q16825 1174 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 LCORLQ8N3X6 602 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 ZNF512BQ96KM6 892 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 SLC4A4Q9Y6R1 1079 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 MROH5Q6ZUA9 1318 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 WDR19Q8NEZ3 1342 aa18.15■□□□□ 0.5
ARHGEF40-203ENST00000554514 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 GUCY1A2P33402 732 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 CEP135Q66GS9 1140 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 TMEM87BQ96K49 555 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 KCNJ14Q9UNX9 436 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 FGFR2P21802 821 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 SHC4Q6S5L8 630 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 NBPF11Q86T75 865 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 ZNF34Q8IZ26 560 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 FAM217BQ9NTX9 383 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 LRP2BPQ9P2M1 347 aa18.14■□□□□ 0.49
ARHGEF40-203ENST00000554514 IL6STP40189 918 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 NLRP12P59046 1061 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCZ1BP86790 482 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCZ1P86791 482 aaPredicted RBP18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 SSRP1Q08945 709 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 MFSD6Q6ZSS7 791 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 PDCL2Q8N4E4 241 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 HSP90AA4PQ58FG1 418 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 CCDC112Q8NEF3 446 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 ABCF2Q9UG63 623 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 C4AP0C0L4 1744 aa18.13■□□□□ 0.49
ARHGEF40-203ENST00000554514 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms