RNA–Protein interactions for RNA: ENST00000554303.1

RPGRIP1-205, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-205ENST00000554303 ESRRAP11474 423 aaPredicted RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 DRD2P14416 443 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 SPINK2P20155 84 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 HOXA10P31260 410 aaPredicted RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 ZNF211Q13398 564 aaPredicted RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 HDAC1Q13547 482 aaPredicted RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 FAM50AQ14320 339 aaKnown RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 SGO2Q562F6 1265 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 ANKRD34AQ69YU3 496 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 BEND4Q6ZU67 534 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 GJD3Q8N144 294 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 CXorf38Q8TB03 319 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 SHKBP1Q8TBC3 707 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 TSPAN18Q96SJ8 248 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 DBNDD2Q9BQY9 259 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 BHLHE41Q9C0J9 482 aaPredicted RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 NRSN2Q9GZP1 204 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 KCNG1Q9UIX4 513 aa3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 OAS3Q9Y6K5 1087 aaKnown RBP3.55□□□□□ -1.84
RPGRIP1-205ENST00000554303 COL17A1Q9UMD9 1497 aaPredicted RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 A0A1W2PP55 124 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SART1O43290 800 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 RRP9O43818 475 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 ABL1P00519 1130 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 CTSBP07858 339 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 EDN3P14138 238 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 GRIA4P48058 902 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SF3B2Q13435 895 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 IKBKEQ14164 716 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SF3A1Q15459 793 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 ZNF423Q2M1K9 1284 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SPRED3Q2MJR0 410 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 USPL1Q5W0Q7 1092 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SMG8Q8ND04 991 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 LSM14AQ8ND56 463 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 TTC16Q8NEE8 873 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 ASAP3Q8TDY4 903 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SNX29Q8TEQ0 813 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 PNISRQ8TF01 805 aaKnown RBP3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 TCF12Q99081 682 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 MAF1Q9H063 256 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 KCNF1Q9H3M0 494 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 SUGCTQ9HAC7 445 aa3.54□□□□□ -1.84
RPGRIP1-205ENST00000554303 FAM177BA6PVY3 158 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 WDR64B1ANS9 1081 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 ICMTO60725 284 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 F13BP05160 661 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 MAP4P27816 1152 aaKnown RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 COPB2P35606 906 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 USP5P45974 858 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 ARL4DP49703 201 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 GP2P55259 537 aaKnown RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 EHHADHQ08426 723 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 NBPF9Q3BBW0 867 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 EXOSC6Q5RKV6 272 aaKnown RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 GJC2Q5T442 439 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 LCE3BQ5TA77 95 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 NUTM2GQ5VZR2 741 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 MCTP1Q6DN14 999 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 CDPF1Q6NVV7 123 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 SND1Q7KZF4 910 aaKnown RBP eCLIP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 APBB1IPQ7Z5R6 666 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 NOP9Q86U38 636 aaKnown RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 DTX1Q86Y01 620 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 MSL3Q8N5Y2 521 aaKnown RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 OTUD6BQ8N6M0 293 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 C12orf50Q8NA57 414 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 MICAL1Q8TDZ2 1067 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 FBLIM1Q8WUP2 373 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 MFSD14AQ96MC6 490 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 SENP7Q9BQF6 1050 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 USP26Q9BXU7 913 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 BRINP2Q9C0B6 783 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 SOX17Q9H6I2 414 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 BSDC1Q9NW68 430 aaPredicted RBP3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 USTQ9Y2C2 406 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 COMMD10Q9Y6G5 202 aa3.53□□□□□ -1.84
RPGRIP1-205ENST00000554303 A0A096LPE4 126 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 A0A1W2PPZ6 126 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 ECEL1O95672 775 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 IGHA2P01877 340 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 ADMP35318 185 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 SERPINB4P48594 390 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 ARHGAP4P98171 946 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 GSTM4Q03013 218 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 CALD1Q05682 793 aaKnown RBP3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 HSP90AA2PQ14568 343 aaPredicted RBP3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 CCDC96Q2M329 555 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 FDX2Q6P4F2 183 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 INTS5Q6P9B9 1019 aaKnown RBP3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 CLEC4GQ6UXB4 293 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 CCNJLQ8IV13 435 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 GALNT12Q8IXK2 581 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 C2CD4AQ8NCU7 369 aaPredicted RBP3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 CHMP4BQ9H444 224 aaKnown RBP3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 SWAP70Q9UH65 585 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 HIF3AQ9Y2N7 669 aa3.52□□□□□ -1.85
RPGRIP1-205ENST00000554303 TAL1P17542 331 aaPredicted RBP3.51□□□□□ -1.85
RPGRIP1-205ENST00000554303 SOX4Q06945 474 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms