RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PIGBQ92521 554 aa8.05□□□□□ -1.12
LINC-ROR-201ENST00000553704 SYTL4Q96C24 671 aaPredicted RBP8.05□□□□□ -1.12
LINC-ROR-201ENST00000553704 CARD10Q9BWT7 1032 aa8.05□□□□□ -1.12
LINC-ROR-201ENST00000553704 TMOD3Q9NYL9 352 aa8.05□□□□□ -1.12
LINC-ROR-201ENST00000553704 MAP3K15Q6ZN16 1313 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 ZNF532Q9HCE3 1301 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 IDH1O75874 414 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 SMC2O95347 1197 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 SLC3A2P08195 630 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 ATP1A3P13637 1013 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 HSPA2P54652 639 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 TRIM28Q13263 835 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 APOA5Q6Q788 366 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 SHC4Q6S5L8 630 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 TMC6Q7Z403 805 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 SLC4A9Q96Q91 983 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 ALG1Q9BT22 464 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 EPB41L4AQ9HCS5 686 aaPredicted RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 FBXO3Q9UK99 471 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 ZNF215Q9UL58 517 aaPredicted RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 ANGEL1Q9UNK9 670 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 COL4A1P02462 1669 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 WDR19Q8NEZ3 1342 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 TCRBV5S4A2TA0A5A2 114 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 SNAP23O00161 211 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 LMOD1P29536 600 aaPredicted RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 METAP2P50579 478 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 CTSWP56202 376 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 NLRP12P59046 1061 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 PTPAQ15257 358 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 E4F1Q66K89 784 aaPredicted RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 KRT40Q6A162 431 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 BPIFA3Q9BQP9 254 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 NAT10Q9H0A0 1025 aaKnown RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 OSBPL5Q9H0X9 879 aaPredicted RBP8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
LINC-ROR-201ENST00000553704 CDHR2Q9BYE9 1310 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 NEMFO60524 1076 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 PDE6AP16499 860 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 PNOCQ13519 176 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 SYNE3Q6ZMZ3 975 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 HELBQ8NG08 1087 aaPredicted RBP8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 DPF2Q92785 391 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 CNNM1Q9NRU3 951 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 FAM217BQ9NTX9 383 aaPredicted RBP8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 BCORQ6W2J9 1755 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 SOS2Q07890 1332 aaPredicted RBP8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 UBN2Q6ZU65 1347 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 APPP05067 770 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 CMA1P23946 247 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 DMTNQ08495 405 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 SLC39A14Q15043 492 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 SYCP1Q15431 976 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 NTRK3Q16288 839 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 MAP3K14Q99558 947 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 LY9Q9HBG7 655 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 HPSEQ9Y251 543 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 ZBTB1Q9Y2K1 713 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 PLCH1Q4KWH8 1693 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 KAT6BQ8WYB5 2073 aa8.03□□□□□ -1.12
LINC-ROR-201ENST00000553704 FOXN1O15353 648 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 CTDSPL2Q05D32 466 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 GOLGA8FQ08AF8 430 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 GOLGA8DPQ0D2H9 430 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 PPP1R13BQ96KQ4 1090 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 ZHX1Q9UKY1 873 aaPredicted RBP8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 PHLPP1O60346 1717 aa8.02□□□□□ -1.12
LINC-ROR-201ENST00000553704 ANKRD18BA2A2Z9 1011 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 IRS4O14654 1257 aaPredicted RBP8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 PDE8BO95263 885 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 GUCY1A2P33402 732 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 SYKP43405 635 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 GSDMDP57764 484 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 METTL16Q86W50 562 aaKnown RBP8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 IGDCC4Q8TDY8 1250 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 TUBE1Q9UJT0 475 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 DOT1LQ8TEK3 1739 aa8.02□□□□□ -1.13
LINC-ROR-201ENST00000553704 GOLGA8AA7E2F4 631 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 TMEM232C9JQI7 657 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 ARID4AP29374 1257 aaPredicted RBP8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 FANCCQ00597 558 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 GRIN1Q05586 938 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 TRDNQ13061 729 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 UBE3CQ15386 1083 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 ZRSR1Q15695 479 aaKnown RBP8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 ELF2Q15723 593 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 SPECC1Q5M775 1068 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 STRBPQ96SI9 672 aaKnown RBP8.01□□□□□ -1.13
LINC-ROR-201ENST00000553704 KCND1Q9NSA2 647 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms