RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 TRAPPC3LQ5T215 181 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 NSUN5Q96P11 429 aaKnown RBP9.06□□□□□ -0.96
ATXN3-223ENST00000553686 GGNBP2Q9H3C7 697 aa9.06□□□□□ -0.96
ATXN3-223ENST00000553686 PDGFAP04085 211 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 SOX18P35713 384 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
ATXN3-223ENST00000553686 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 FAM196AQ6ZSG2 479 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 LPIN3Q9BQK8 851 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 ELP3Q9H9T3 547 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 FRRS1LQ9P0K9 344 aa9.05□□□□□ -0.96
ATXN3-223ENST00000553686 CFAP65Q6ZU64 1925 aaKnown RBP9.05□□□□□ -0.96
ATXN3-223ENST00000553686 EIF2AK2P19525 551 aaKnown RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 SERPINB4P48594 390 aa9.04□□□□□ -0.96
ATXN3-223ENST00000553686 XPCQ01831 940 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 TRIM28Q13263 835 aaKnown RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 PDE12Q6L8Q7 609 aaKnown RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
ATXN3-223ENST00000553686 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
ATXN3-223ENST00000553686 SMG9Q9H0W8 520 aaKnown RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 ABI2Q9NYB9 513 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-223ENST00000553686 POLIQ9UNA4 740 aa9.04□□□□□ -0.96
ATXN3-223ENST00000553686 CEP152O94986 1710 aa9.04□□□□□ -0.96
ATXN3-223ENST00000553686 METP08581 1390 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 ANKRD30AQ9BXX3 1397 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 ICMTO60725 284 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 TRIM37O94972 964 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 GHRHP01286 108 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 PRRT3Q5FWE3 981 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 DMRTC2Q8IXT2 367 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-223ENST00000553686 TTC9Q92623 222 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 TMEM63CQ9P1W3 806 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 EGFL7Q9UHF1 273 aa9.03□□□□□ -0.96
ATXN3-223ENST00000553686 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-223ENST00000553686 HYAL2Q12891 473 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 XKR5Q6UX68 686 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 PLD4Q96BZ4 506 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 RBSNQ9H1K0 784 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 GLI3P10071 1580 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 SPATA31A3Q5VYP0 1347 aa9.02□□□□□ -0.97
ATXN3-223ENST00000553686 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 A6NHS1 94 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 FZD6O60353 706 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 IGHA1P01876 353 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 ITGB2P05107 769 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-223ENST00000553686 SPATA31C1P0DKV0 1188 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 GRIK5Q16478 980 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 ZNF326Q5BKZ1 582 aaKnown RBP9.01□□□□□ -0.97
ATXN3-223ENST00000553686 COL13A1Q5TAT6 717 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-223ENST00000553686 CCDC87Q9NVE4 849 aa9.01□□□□□ -0.97
ATXN3-223ENST00000553686 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
ATXN3-223ENST00000553686 MSL1Q68DK7 614 aa9□□□□□ -0.97
ATXN3-223ENST00000553686 KRT28Q7Z3Y7 464 aa9□□□□□ -0.97
ATXN3-223ENST00000553686 GLYCTKQ8IVS8 523 aa9□□□□□ -0.97
ATXN3-223ENST00000553686 SPACA7Q96KW9 195 aa9□□□□□ -0.97
ATXN3-223ENST00000553686 C1QTNF9BB2RNN3 333 aa8.99□□□□□ -0.97
ATXN3-223ENST00000553686 H3BRB1 525 aa8.99□□□□□ -0.97
ATXN3-223ENST00000553686 USP5P45974 858 aa8.99□□□□□ -0.97
ATXN3-223ENST00000553686 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-223ENST00000553686 TUT1Q9H6E5 874 aaKnown RBP8.99□□□□□ -0.97
ATXN3-223ENST00000553686 ABCC5O15440 1437 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 ADGRL2O95490 1459 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 MSTNO14793 375 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 RAC1P63000 192 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 ECM1Q16610 540 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 GDF6Q6KF10 455 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-223ENST00000553686 CD163Q86VB7 1156 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 NCAPG2Q86XI2 1143 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 WFDC8Q8IUA0 241 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 C1orf127Q8N9H9 656 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 BTG4Q9NY30 223 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 CEP350Q5VT06 3117 aa8.98□□□□□ -0.97
ATXN3-223ENST00000553686 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-223ENST00000553686 CES1P23141 567 aa8.97□□□□□ -0.97
ATXN3-223ENST00000553686 GRIK4Q16099 956 aa8.97□□□□□ -0.97
ATXN3-223ENST00000553686 SPOCK3Q9BQ16 436 aa8.97□□□□□ -0.97
ATXN3-223ENST00000553686 LAMC1P11047 1609 aa8.97□□□□□ -0.97
ATXN3-223ENST00000553686 PXDNQ92626 1479 aa8.96□□□□□ -0.97
ATXN3-223ENST00000553686 TMEM131LA2VDJ0 1609 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 BRD1O95696 1058 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 CHRNA4P43681 627 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 EHHADHQ08426 723 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 PDE3BQ13370 1112 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 PMEPA1Q969W9 287 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
ATXN3-223ENST00000553686 SPATA31A5Q5VU36 1347 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 SPATA31A7Q8IWB4 1347 aa8.96□□□□□ -0.98
ATXN3-223ENST00000553686 KIF4AO95239 1232 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 HSPA6P17066 643 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 GPR162Q16538 588 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 CEP135Q66GS9 1140 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms