RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
MTHFD1-204ENST00000553405 RNF113AO15541 343 aaKnown RBP17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 LDHCP07864 332 aa17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 BTDP43251 543 aa17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 RGS3P49796 1198 aa17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 SLF2Q8IX21 1173 aa17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 TDRD3Q9H7E2 651 aaKnown RBP17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 ZNF70Q9UC06 446 aaPredicted RBP17.97■□□□□ 0.47
MTHFD1-204ENST00000553405 FOCADQ5VW36 1801 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 WDHD1O75717 1129 aaPredicted RBP17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 EAPPQ56P03 285 aaPredicted RBP17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 BMP2KLQ5H9B9 411 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 ANGEL2Q5VTE6 544 aaKnown RBP17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 OSBP2Q969R2 916 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 FSD1Q9BTV5 496 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 GGA3Q9NZ52 723 aa17.96■□□□□ 0.47
MTHFD1-204ENST00000553405 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 DYNLL1P63167 89 aaKnown RBP17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 NFIAQ12857 509 aa17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 FKBP1CQ5VVH2 108 aa17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 PUS7LQ9H0K6 701 aaKnown RBP17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 DDX60LQ5H9U9 1706 aaKnown RBP17.95■□□□□ 0.46
MTHFD1-204ENST00000553405 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 ITGBL1O95965 494 aaPredicted RBP17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 CACNB3P54284 484 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 ZSCAN25Q6NSZ9 544 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 MIGA1Q8NAN2 632 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 APPBP2Q92624 585 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 IDI2Q9BXS1 227 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 USP40Q9NVE5 1235 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 FAM198AQ9UFP1 575 aa17.94■□□□□ 0.46
MTHFD1-204ENST00000553405 M0R2C6 588 aa17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 MAP1SQ66K74 1059 aaPredicted RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 CHADLQ6NUI6 762 aa17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 DLK2Q6UY11 383 aa17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 LCORLQ8N3X6 602 aa17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 RBM46Q8TBY0 533 aaKnown RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 SEC62Q99442 399 aaKnown RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 DDX4Q9NQI0 724 aaKnown RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 MKRN1Q9UHC7 482 aaKnown RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 SCAF8Q9UPN6 1271 aaKnown RBP17.93■□□□□ 0.46
MTHFD1-204ENST00000553405 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 NPM3O75607 178 aaKnown RBP17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 TOMM70O94826 608 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 IL25Q9H293 177 aa17.92■□□□□ 0.46
MTHFD1-204ENST00000553405 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 FOXP2O15409 715 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 NMIQ13287 307 aaPredicted RBP17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 APOBEC3FQ8IUX4 373 aaKnown RBP17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 CDAN1Q8IWY9 1227 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 ZFPM1Q8IX07 1006 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 STRBPQ96SI9 672 aaKnown RBP17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 GLIS2Q9BZE0 524 aaPredicted RBP17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 PASKQ96RG2 1323 aa17.91■□□□□ 0.46
MTHFD1-204ENST00000553405 COL2A1P02458 1487 aaPredicted RBP17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 MAGEB6P1A0A0J9YX57 407 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 MYO1BO43795 1136 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 MBD4O95243 580 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 BAG3O95817 575 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 CHMLP26374 656 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 SH3BP5LQ7L8J4 393 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 FAM83AQ86UY5 434 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 SIPA1L1O43166 1804 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 ATRNL1Q5VV63 1379 aa17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
MTHFD1-204ENST00000553405 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 PLCG2P16885 1265 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 FMR1Q06787 632 aaKnown RBP eCLIP17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 RASA3Q14644 834 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 KRT26Q7Z3Y9 468 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 USP48Q86UV5 1035 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 CERS3Q8IU89 383 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 TEX11Q8IYF3 940 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 DCPSQ96C86 337 aaKnown RBP17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 DEFB129Q9H1M3 183 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 HELLSQ9NRZ9 838 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
MTHFD1-204ENST00000553405 TRAF5O00463 557 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 GPAA1O43292 621 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 PRKAB2O43741 272 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 ENTPD3O75355 529 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 CDC37L1Q7L3B6 337 aa17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 ZNF589Q86UQ0 364 aaPredicted RBP17.88■□□□□ 0.45
MTHFD1-204ENST00000553405 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms