RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 MBD4O95243 580 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 FGAP02671 866 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 HSP90AA1P07900 732 aaKnown RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 CHRNA5P30532 468 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 ALX1Q15699 326 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 BLOC1S2Q6QNY1 142 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 EYA3Q99504 573 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 MTFR1LQ9H019 292 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 GPR101Q96P66 508 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
CACNB3-224ENST00000552812 ZC3H12CQ9C0D7 883 aaKnown RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
CACNB3-224ENST00000552812 PATL2C9JE40 543 aaKnown RBP13.41□□□□□ -0.26
CACNB3-224ENST00000552812 PRDX5P30044 214 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 MECOMQ03112 1051 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 TMX3Q96JJ7 454 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 RTFDC1Q9BY42 306 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-224ENST00000552812 SLKQ9H2G2 1235 aaPredicted RBP13.41□□□□□ -0.26
CACNB3-224ENST00000552812 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
CACNB3-224ENST00000552812 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 LDHBP07195 334 aaKnown RBP13.4□□□□□ -0.26
CACNB3-224ENST00000552812 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
CACNB3-224ENST00000552812 RPS6KB1P23443 525 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 POLD1P28340 1107 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 AK2P54819 239 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 ADGRA1Q86SQ6 560 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 ZNF384Q8TF68 577 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 C7orf43Q8WVR3 580 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 FAM205AQ6ZU69 1335 aa13.4□□□□□ -0.26
CACNB3-224ENST00000552812 ZNF213O14771 459 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 APPP05067 770 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 ANKRD1Q15327 319 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 OLFM4Q6UX06 510 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 DZIP1Q86YF9 867 aaKnown RBP13.39□□□□□ -0.27
CACNB3-224ENST00000552812 LCORLQ8N3X6 602 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
CACNB3-224ENST00000552812 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 E7EWF7 191 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 ZBTB7AO95365 584 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 DDIT3P35638 169 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 GSTO1P78417 241 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 CUL4AQ13619 759 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 IFNL3Q8IZI9 196 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 TTLL6Q8N841 843 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
CACNB3-224ENST00000552812 INTS4Q96HW7 963 aaKnown RBP13.39□□□□□ -0.27
CACNB3-224ENST00000552812 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
CACNB3-224ENST00000552812 CPA1P15085 419 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 TGFB2P61812 414 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 SPRYD3Q8NCJ5 442 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 ZSCAN31Q96LW9 406 aaPredicted RBP13.38□□□□□ -0.27
CACNB3-224ENST00000552812 NAPBQ9H115 298 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
CACNB3-224ENST00000552812 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 SUGT1Q9Y2Z0 365 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
CACNB3-224ENST00000552812 FAM205CA6NFA0 338 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 LDHCP07864 332 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 R3HDM1Q15032 1099 aaKnown RBP13.37□□□□□ -0.27
CACNB3-224ENST00000552812 GIMAP6Q6P9H5 292 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 DHX32Q7L7V1 743 aaKnown RBP13.37□□□□□ -0.27
CACNB3-224ENST00000552812 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-224ENST00000552812 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
CACNB3-224ENST00000552812 JAG2Q9Y219 1238 aa13.37□□□□□ -0.27
CACNB3-224ENST00000552812 A0A0G2JLW4 131 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 KCNA3P22001 575 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 MFSD14BQ5SR56 506 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 CHD4Q14839 1912 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 G3V3G9 751 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 DPEP1P16444 411 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 TDO2P48775 406 aa13.36□□□□□ -0.27
CACNB3-224ENST00000552812 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms