RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 LCORLQ8N3X6 602 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 BLZF1Q9H2G9 400 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 CRB1P82279 1406 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 ARID5AQ03989 594 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 TTLL11Q8NHH1 800 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 SMARCC1Q92922 1105 aaPredicted RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 BMP2KQ9NSY1 1161 aaPredicted RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 CLIC4Q9Y696 253 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 ADGRB1O14514 1584 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 SORBS3O60504 671 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 KRT40Q6A162 431 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 INTS4Q96HW7 963 aaKnown RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 POLR2DO15514 142 aaKnown RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 CCT6AP40227 531 aaKnown RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 POLA2Q14181 598 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 AKNAD1Q5T1N1 836 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 WASF1Q92558 559 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 HELLSQ9NRZ9 838 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 COL9A3Q14050 684 aaPredicted RBP12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 GRAMD1CQ8IYS0 662 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 IFNL3Q8IZI9 196 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 RASGRF1Q13972 1273 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 TMEM132AQ24JP5 1023 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 SMARCE1Q969G3 411 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 STX1AQ16623 288 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 FRMPD1Q5SYB0 1578 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 NMT2O60551 498 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 TFAP4Q01664 338 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 NRBP1Q9UHY1 535 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 KRT23Q9C075 422 aa12.38□□□□□ -0.43
TGFBR1-209ENST00000552516 SKILP12757 684 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 UBASH3AP57075 661 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 PNOCQ13519 176 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 KARSQ15046 597 aaKnown RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 FAM200AQ8TCP9 573 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 CELF1Q92879 486 aaKnown RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 GTF3C6Q969F1 213 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 ZSCAN16Q9H4T2 348 aaPredicted RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 NR5A1Q13285 461 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 PCCAP05165 728 aaPredicted RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 CYP2D6P10635 497 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 PDIA3P30101 505 aaKnown RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 CBX8Q9HC52 389 aa12.37□□□□□ -0.43
TGFBR1-209ENST00000552516 UBE2Q2LH0YL09 131 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 MAEAQ7L5Y9 396 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 LRRC47Q8N1G4 583 aaKnown RBP12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 HINFPQ9BQA5 517 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 USH1GQ495M9 461 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 TBC1D7Q9P0N9 293 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 SAMM50Q9Y512 469 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 MATR3P43243 847 aaKnown RBP eCLIP12.36□□□□□ -0.435e-6■■□□□ 12.5
TGFBR1-209ENST00000552516 MFSD14BQ5SR56 506 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 DBNDD1Q9H9R9 158 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 TMOD2Q9NZR1 351 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 NOLC1Q14978 699 aaKnown RBP eCLIP12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 ERICH4A6NGS2 130 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 CASP1P29466 404 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 PRDX5P30044 214 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 TTLL12Q14166 644 aaPredicted RBP12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 TBC1D10BQ4KMP7 808 aaPredicted RBP12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 OSBPL3Q9H4L5 887 aa12.36□□□□□ -0.43
TGFBR1-209ENST00000552516 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 TEX35Q5T0J7 233 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 KAZALD1Q96I82 304 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 CEP89Q96ST8 783 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 CALM1P0DP23 149 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 CALM2P0DP24 149 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 CALM3P0DP25 149 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 PDIA6Q15084 440 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 SMYD4Q8IYR2 804 aaPredicted RBP12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 POLD4Q9HCU8 107 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
TGFBR1-209ENST00000552516 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms