RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 SGMS1Q86VZ5 419 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 NSUN7Q8NE18 718 aaKnown RBP9.16□□□□□ -0.94
TMEM116-214ENST00000551297 ESR2Q92731 530 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 TCEANC2Q96MN5 208 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-214ENST00000551297 PODXL2Q9NZ53 605 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 TFCP2L1Q9NZI6 479 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 ARPP21Q9UBL0 812 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-214ENST00000551297 NAP1L2Q9ULW6 460 aaPredicted RBP9.16□□□□□ -0.94
TMEM116-214ENST00000551297 TAF6LQ9Y6J9 622 aa9.16□□□□□ -0.94
TMEM116-214ENST00000551297 GOLGA6L4A6NEF3 574 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 CCDC69A6NI79 296 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 POLRMTO00411 1230 aaKnown RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 CHGBP05060 677 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 PDIA3P30101 505 aaKnown RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 ALDH1B1P30837 517 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 METAP2P50579 478 aaKnown RBP eCLIP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 APOBRQ0VD83 1088 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 ST3GAL1Q11201 340 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 SCRN1Q12765 414 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 TTLL5Q6EMB2 1281 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 CAVIN1Q6NZI2 390 aaKnown RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 NFXL1Q6ZNB6 911 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 UBAC1Q9BSL1 405 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
TMEM116-214ENST00000551297 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 ZNF287Q9HBT7 754 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 SUGT1Q9Y2Z0 365 aa9.15□□□□□ -0.94
TMEM116-214ENST00000551297 MYH15Q9Y2K3 1946 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 GSG1L2A8MUP6 293 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 ZBTB43O43298 467 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 UFL1O94874 794 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 APBA3O96018 575 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 CALM1P0DP23 149 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 CALM2P0DP24 149 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 CALM3P0DP25 149 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 NPR1P16066 1061 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 PPARAQ07869 468 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 TRIM29Q14134 588 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 TMEM67Q5HYA8 995 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
TMEM116-214ENST00000551297 BRAPQ7Z569 592 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 IQCA1Q86XH1 822 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 TBC1D10CQ8IV04 446 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 TRIM22Q8IYM9 498 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 LCORLQ8N3X6 602 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
TMEM116-214ENST00000551297 EYA3Q99504 573 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 RIOK1Q9BRS2 568 aaKnown RBP9.14□□□□□ -0.95
TMEM116-214ENST00000551297 EPB41L4AQ9HCS5 686 aaPredicted RBP9.14□□□□□ -0.95
TMEM116-214ENST00000551297 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
TMEM116-214ENST00000551297 COL4A1P02462 1669 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 GOLGA8AA7E2F4 631 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 IFIT3O14879 490 aaKnown RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 FIBPO43427 364 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 PDE4BQ07343 736 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 CHAF1AQ13111 956 aaPredicted RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 WTAPQ15007 396 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 SLFNL1Q499Z3 407 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 SBK1Q52WX2 424 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 USP48Q86UV5 1035 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 TDRD7Q8NHU6 1098 aaKnown RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 AKT1S1Q96B36 256 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 NSUN4Q96CB9 384 aaKnown RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 C8orf76Q96K31 380 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 LARP6Q9BRS8 491 aaKnown RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 LRRC2Q9BYS8 371 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 GRPEL1Q9HAV7 217 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 TOMM22Q9NS69 142 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 DDX19AQ9NUU7 478 aaKnown RBP9.13□□□□□ -0.95
TMEM116-214ENST00000551297 TAOK2Q9UL54 1235 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 SLC12A7Q9Y666 1083 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 LTBP1Q14766 1721 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 TAF1P21675 1872 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 NAV1Q8NEY1 1877 aa9.13□□□□□ -0.95
TMEM116-214ENST00000551297 ROBO3Q96MS0 1386 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 NEDD4P46934 1319 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 IRS2Q9Y4H2 1338 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 B4E1Z4 1266 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 SNAP23O00161 211 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 ORC4O43929 436 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 IL1R1P14778 569 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 XBP1P17861 261 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 ANTXR2P58335 489 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 DDR1Q08345 913 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 RESTQ13127 1097 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 APOA5Q6Q788 366 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 SP8Q8IXZ3 490 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 MIGA1Q8NAN2 632 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 SPATA32Q96LK8 384 aa9.12□□□□□ -0.95
TMEM116-214ENST00000551297 COA1Q9GZY4 146 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms