RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 HHIPL2Q6UWX4 724 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 TEKT1Q969V4 418 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 PRMT6Q96LA8 375 aaPredicted RBP16.32■□□□□ 0.2
ERBB3-215ENST00000550828 ZDHHC15Q96MV8 337 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 MRIQ9BWK5 157 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.2
ERBB3-215ENST00000550828 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
ERBB3-215ENST00000550828 MYOZ2Q9NPC6 264 aa16.32■□□□□ 0.2
ERBB3-215ENST00000550828 GPR75-ASB3A0A0A6YYF3 556 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 SPDYE2BA6NHP3 402 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 SPDYE6P0CI01 402 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 RHBDL3P58872 404 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 APPBP2Q92624 585 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
ERBB3-215ENST00000550828 LAMB1P07942 1786 aa16.31■□□□□ 0.2
ERBB3-215ENST00000550828 WNT10BO00744 389 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 IGSF3O75054 1194 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 BTDP43251 543 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 GSTO1P78417 241 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 NBPF9Q3BBW0 867 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 RBM26Q5T8P6 1007 aaKnown RBP16.3■□□□□ 0.2
ERBB3-215ENST00000550828 CCDC129Q6ZRS4 1044 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 TAF1DQ9H5J8 278 aaPredicted RBP16.3■□□□□ 0.2
ERBB3-215ENST00000550828 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 HDAC9Q9UKV0 1011 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 LAMA4Q16363 1823 aa16.3■□□□□ 0.2
ERBB3-215ENST00000550828 H7C1D1 291 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 MBD4O95243 580 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 EPHX2P34913 555 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 PPP4CP60510 307 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 CDC42EP5Q6NZY7 148 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 OGFOD1Q8N543 542 aa16.29■□□□□ 0.2
ERBB3-215ENST00000550828 SH3RF3Q8TEJ3 882 aaPredicted RBP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 ADARB2Q9NS39 739 aaKnown RBP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 AATFQ9NY61 560 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERBB3-215ENST00000550828 FOXP2O15409 715 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 LDHCP07864 332 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 POTEIP0CG38 1075 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 RBM5P52756 815 aaKnown RBP eCLIP16.28■□□□□ 0.2
ERBB3-215ENST00000550828 DLGAP5Q15398 846 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
ERBB3-215ENST00000550828 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 TDRD3Q9H7E2 651 aaKnown RBP16.28■□□□□ 0.2
ERBB3-215ENST00000550828 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
ERBB3-215ENST00000550828 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 CLRN2A0PK11 232 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 CDC45O75419 566 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 MMP14P50281 582 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 CACNB3P54284 484 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
ERBB3-215ENST00000550828 SLF2Q8IX21 1173 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
ERBB3-215ENST00000550828 GPAA1O43292 621 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 PRKAB2O43741 272 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 WDHD1O75717 1129 aaPredicted RBP16.26■□□□□ 0.19
ERBB3-215ENST00000550828 NFIAQ12857 509 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 STRBPQ96SI9 672 aaKnown RBP16.26■□□□□ 0.19
ERBB3-215ENST00000550828 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
ERBB3-215ENST00000550828 HELLSQ9NRZ9 838 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
ERBB3-215ENST00000550828 SCAF8Q9UPN6 1271 aaKnown RBP16.26■□□□□ 0.19
ERBB3-215ENST00000550828 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
ERBB3-215ENST00000550828 IQCA1LA6NCM1 817 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 HIP1O00291 1037 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 LRRFIP1Q32MZ4 808 aaKnown RBP16.25■□□□□ 0.19
ERBB3-215ENST00000550828 MCMDC2Q4G0Z9 681 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 ESYT1Q9BSJ8 1104 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 USP40Q9NVE5 1235 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 FAM198AQ9UFP1 575 aa16.25■□□□□ 0.19
ERBB3-215ENST00000550828 MYH8P13535 1937 aa16.24■□□□□ 0.19
ERBB3-215ENST00000550828 SGSM2O43147 1006 aa16.24■□□□□ 0.19
ERBB3-215ENST00000550828 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
ERBB3-215ENST00000550828 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
ERBB3-215ENST00000550828 ZFPM1Q8IX07 1006 aa16.24■□□□□ 0.19
ERBB3-215ENST00000550828 EPB41L4AQ9HCS5 686 aaPredicted RBP16.24■□□□□ 0.19
ERBB3-215ENST00000550828 GGA3Q9NZ52 723 aa16.24■□□□□ 0.19
ERBB3-215ENST00000550828 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 TRPM7Q96QT4 1865 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 SDR42E1Q8WUS8 393 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 AIDAQ96BJ3 306 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
ERBB3-215ENST00000550828 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
ERBB3-215ENST00000550828 RAD50Q92878 1312 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 GSG1L2A8MUP6 293 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 BAG3O95817 575 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 EVX2Q03828 476 aa16.22■□□□□ 0.19
ERBB3-215ENST00000550828 EAPPQ56P03 285 aaPredicted RBP16.22■□□□□ 0.19
ERBB3-215ENST00000550828 ANGEL2Q5VTE6 544 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms