RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 APOBEC3HQ6NTF7 200 aaKnown RBP17.04■□□□□ 0.32
CNOT2-220ENST00000549750 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
CNOT2-220ENST00000549750 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
CNOT2-220ENST00000549750 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
CNOT2-220ENST00000549750 TCP10L2B9ZVM9 353 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 SEMA3EO15041 775 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 MYCP01106 439 aaPredicted RBP17.03■□□□□ 0.32
CNOT2-220ENST00000549750 GJA5P36382 358 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 MEIS3Q99687 375 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 TMEM39BQ9GZU3 492 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 CEP126Q9P2H0 1117 aa17.03■□□□□ 0.32
CNOT2-220ENST00000549750 SALL1Q9NSC2 1324 aa17.02■□□□□ 0.32
CNOT2-220ENST00000549750 GNAI3P08754 354 aa17.02■□□□□ 0.32
CNOT2-220ENST00000549750 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.02■□□□□ 0.32
CNOT2-220ENST00000549750 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.32
CNOT2-220ENST00000549750 DPF3Q92784 378 aa17.02■□□□□ 0.32
CNOT2-220ENST00000549750 TMOD2Q9NZR1 351 aa17.02■□□□□ 0.32
CNOT2-220ENST00000549750 IPO8O15397 1037 aaKnown RBP17.01■□□□□ 0.31
CNOT2-220ENST00000549750 HOOK2Q96ED9 719 aa17.01■□□□□ 0.31
CNOT2-220ENST00000549750 SIL1Q9H173 461 aa17.01■□□□□ 0.31
CNOT2-220ENST00000549750 ZFYVE28Q9HCC9 887 aa17.01■□□□□ 0.31
CNOT2-220ENST00000549750 GNL3LQ9NVN8 582 aaKnown RBP17.01■□□□□ 0.31
CNOT2-220ENST00000549750 COL6A3P12111 3177 aa17.01■□□□□ 0.31
CNOT2-220ENST00000549750 MAP3K9P80192 1104 aa17■□□□□ 0.31
CNOT2-220ENST00000549750 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
CNOT2-220ENST00000549750 TRIM27P14373 513 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 VGLL4Q14135 290 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 TAF1CQ15572 869 aaPredicted RBP16.99■□□□□ 0.31
CNOT2-220ENST00000549750 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 SH3TC2Q8TF17 1288 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 MS4A4AQ96JQ5 239 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
CNOT2-220ENST00000549750 PA2G4Q9UQ80 394 aaKnown RBP16.99■□□□□ 0.31
CNOT2-220ENST00000549750 CACNB3P54284 484 aa16.98■□□□□ 0.31
CNOT2-220ENST00000549750 ELP3Q9H9T3 547 aa16.98■□□□□ 0.31
CNOT2-220ENST00000549750 DAGLAQ9Y4D2 1042 aa16.98■□□□□ 0.31
CNOT2-220ENST00000549750 SPDYE5A6NIY4 337 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 SRGAP3O43295 1099 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 PRDX5P30044 214 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 PHKA1P46020 1223 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 KIF22Q14807 665 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
CNOT2-220ENST00000549750 FAM151AQ8WW52 585 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 CSADQ9Y600 493 aa16.97■□□□□ 0.31
CNOT2-220ENST00000549750 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
CNOT2-220ENST00000549750 LDHBP07195 334 aaKnown RBP16.96■□□□□ 0.31
CNOT2-220ENST00000549750 GTF2A2P52657 109 aa16.96■□□□□ 0.31
CNOT2-220ENST00000549750 DCAF15Q66K64 600 aa16.96■□□□□ 0.31
CNOT2-220ENST00000549750 BRI3BPQ8WY22 251 aa16.96■□□□□ 0.31
CNOT2-220ENST00000549750 PRO3102Q9H379 93 aa16.96■□□□□ 0.31
CNOT2-220ENST00000549750 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
CNOT2-220ENST00000549750 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 BCAR3O75815 825 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 GNRH1P01148 92 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 DIXDC1Q155Q3 683 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 CCL15Q16663 113 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 CDC42EP5Q6NZY7 148 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 SNCAIPQ9Y6H5 919 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 MYH2Q9UKX2 1941 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 GAKO14976 1311 aa16.95■□□□□ 0.3
CNOT2-220ENST00000549750 RFX7Q2KHR2 1363 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 A0A1B0GUL7 405 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 GNAI2P04899 355 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 ADORA1P30542 326 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 MNX1P50219 401 aaPredicted RBP16.94■□□□□ 0.3
CNOT2-220ENST00000549750 PRMT2P55345 433 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 RASGRF1Q13972 1273 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 NKX2-3Q8TAU0 364 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 WRNIP1Q96S55 665 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 ZNF341Q9BYN7 854 aa16.94■□□□□ 0.3
CNOT2-220ENST00000549750 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
CNOT2-220ENST00000549750 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
CNOT2-220ENST00000549750 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
CNOT2-220ENST00000549750 FAM43AQ8N2R8 423 aa16.93■□□□□ 0.3
CNOT2-220ENST00000549750 SHISA4Q96DD7 197 aa16.93■□□□□ 0.3
CNOT2-220ENST00000549750 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
CNOT2-220ENST00000549750 ARHGAP39Q9C0H5 1083 aa16.93■□□□□ 0.3
CNOT2-220ENST00000549750 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
CNOT2-220ENST00000549750 LAMA3Q16787 3333 aa16.93■□□□□ 0.3
CNOT2-220ENST00000549750 DOCK2Q92608 1830 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 A0A1W2PPC1 479 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 TLR2O60603 784 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 TIMM10P62072 90 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 TFCP2Q12800 502 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 NFIAQ12857 509 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 PPIL2Q13356 520 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 MTFR1Q15390 333 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 ZKSCAN2Q63HK3 967 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
CNOT2-220ENST00000549750 XAGE2Q96GT9 111 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
CNOT2-220ENST00000549750 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms