RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
COX6A1-202ENST00000549525 KCNH4Q9UQ05 1017 aa8.64□□□□□ -1.03
COX6A1-202ENST00000549525 OPLAHO14841 1288 aa8.63□□□□□ -1.03
COX6A1-202ENST00000549525 ZNF468Q5VIY5 522 aaPredicted RBP8.63□□□□□ -1.03
COX6A1-202ENST00000549525 RAB44Q7Z6P3 723 aaPredicted RBP8.63□□□□□ -1.03
COX6A1-202ENST00000549525 UNC5CLQ8IV45 518 aa8.63□□□□□ -1.03
COX6A1-202ENST00000549525 SHISA8B8ZZ34 492 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 OIP5O43482 229 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 PCBP4P57723 403 aaKnown RBP8.62□□□□□ -1.03
COX6A1-202ENST00000549525 SPEM2Q0P670 501 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 CHRNA2Q15822 529 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 SLCO4C1Q6ZQN7 724 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 TOM1L2Q6ZVM7 507 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 TREML1Q86YW5 311 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 ANKRD24Q8TF21 1146 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 USP21Q9UK80 565 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
COX6A1-202ENST00000549525 NFAT5O94916 1531 aa8.62□□□□□ -1.03
COX6A1-202ENST00000549525 CDK12Q9NYV4 1490 aaPredicted RBP8.62□□□□□ -1.03
COX6A1-202ENST00000549525 WDR17Q8IZU2 1322 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 NEURL1BA8MQ27 555 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 FCHSD1Q86WN1 690 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 GOLGA6L1Q8N7Z2 621 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 CARD10Q9BWT7 1032 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
COX6A1-202ENST00000549525 TRPC5Q9UL62 973 aaPredicted RBP8.61□□□□□ -1.03
COX6A1-202ENST00000549525 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
COX6A1-202ENST00000549525 CCDC9Q9Y3X0 531 aaKnown RBP8.61□□□□□ -1.03
COX6A1-202ENST00000549525 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
COX6A1-202ENST00000549525 MAP2P11137 1827 aaKnown RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 ZBTB39O15060 712 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 FBLN1P23142 703 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 BRD2P25440 801 aaKnown RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 ADH6P28332 368 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 ARSDP51689 593 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 MAP3K10Q02779 954 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 VPS72Q15906 364 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 SYT9Q86SS6 491 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 RAPGEF4Q8WZA2 1011 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 AVENQ9NQS1 362 aaPredicted RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 ADAMTS8Q9UP79 889 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 DNMT3AQ9Y6K1 912 aaPredicted RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 PHRF1Q9P1Y6 1649 aaKnown RBP8.6□□□□□ -1.03
COX6A1-202ENST00000549525 PLEKHG2Q9H7P9 1386 aa8.6□□□□□ -1.03
COX6A1-202ENST00000549525 AFF2P51816 1311 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 U2AF1L5P0DN76 240 aaPredicted RBP8.59□□□□□ -1.03
COX6A1-202ENST00000549525 EPXP11678 715 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 IL13P35225 146 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 U2AF1Q01081 240 aaKnown RBP eCLIP8.59□□□□□ -1.03
COX6A1-202ENST00000549525 EIF4A2Q14240 407 aaKnown RBP8.59□□□□□ -1.03
COX6A1-202ENST00000549525 GALNT6Q8NCL4 622 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 GTF3C2Q8WUA4 911 aaPredicted RBP8.59□□□□□ -1.03
COX6A1-202ENST00000549525 MDFIQ99750 246 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 GSX2Q9BZM3 304 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 STIM2Q9P246 746 aa8.59□□□□□ -1.03
COX6A1-202ENST00000549525 CRB1P82279 1406 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 MTMR3Q13615 1198 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 AMOTQ4VCS5 1084 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 TCP11L2Q8N4U5 519 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 NGEFQ8N5V2 710 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 HELQQ8TDG4 1101 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
COX6A1-202ENST00000549525 SLIT2O94813 1529 aa8.58□□□□□ -1.04
COX6A1-202ENST00000549525 COL5A2P05997 1499 aaPredicted RBP8.57□□□□□ -1.04
COX6A1-202ENST00000549525 NWD2Q9ULI1 1742 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 FAM181BA6NEQ2 426 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 SIN3BO75182 1162 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 RGL4Q8IZJ4 473 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
COX6A1-202ENST00000549525 SPG7Q9UQ90 795 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 LTN1O94822 1766 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 ABCA3Q99758 1704 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 MARF1Q9Y4F3 1742 aaKnown RBP8.57□□□□□ -1.04
COX6A1-202ENST00000549525 CRYBG1Q9Y4K1 1723 aa8.57□□□□□ -1.04
COX6A1-202ENST00000549525 IGSF1Q8N6C5 1336 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 MAPK8IP3Q9UPT6 1336 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 CAMTA1Q9Y6Y1 1673 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 IL2RBP14784 551 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 EPB42P16452 691 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 HOXB4P17483 251 aaPredicted RBP8.56□□□□□ -1.04
COX6A1-202ENST00000549525 RXRBP28702 533 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 RBM6P78332 1123 aaKnown RBP8.56□□□□□ -1.04
COX6A1-202ENST00000549525 PLEKHO1Q53GL0 409 aaPredicted RBP8.56□□□□□ -1.04
COX6A1-202ENST00000549525 PNISRQ8TF01 805 aaKnown RBP8.56□□□□□ -1.04
COX6A1-202ENST00000549525 BHMTQ93088 406 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 KCNMB2Q9Y691 235 aa8.56□□□□□ -1.04
COX6A1-202ENST00000549525 SPATA31A1Q5TZJ5 1347 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 SPATA31A5Q5VU36 1347 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 SPATA31A7Q8IWB4 1347 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 LRP6O75581 1613 aa8.55□□□□□ -1.04
COX6A1-202ENST00000549525 EXOC5O00471 708 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms