RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 NACAP1Q9BZK3 213 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 RNF41Q9H4P4 317 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-206ENST00000549505 CFAP45Q9UL16 551 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 FAM43AQ8N2R8 423 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 TDRD7Q8NHU6 1098 aaKnown RBP11.72□□□□□ -0.53
RAB5B-206ENST00000549505 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
RAB5B-206ENST00000549505 NSUN4Q96CB9 384 aaKnown RBP11.72□□□□□ -0.53
RAB5B-206ENST00000549505 NEDD4P46934 1319 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 RALYLQ86SE5 291 aaKnown RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 FAM217BQ9NTX9 383 aaPredicted RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 ORC4O43929 436 aa11.71□□□□□ -0.53
RAB5B-206ENST00000549505 RFC4P35249 363 aa11.71□□□□□ -0.53
RAB5B-206ENST00000549505 TRDNQ13061 729 aa11.71□□□□□ -0.53
RAB5B-206ENST00000549505 MEX3CQ5U5Q3 659 aaKnown RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
RAB5B-206ENST00000549505 RBSNQ9H1K0 784 aa11.71□□□□□ -0.53
RAB5B-206ENST00000549505 QTRT2Q9H974 415 aaKnown RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
RAB5B-206ENST00000549505 CDKL5O76039 1030 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 IL1R1P14778 569 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 PPP4CP60510 307 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 PRR5LQ6MZQ0 368 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 APOA5Q6Q788 366 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.54
RAB5B-206ENST00000549505 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 AKT1S1Q96B36 256 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 RTEL1Q9NZ71 1219 aa11.71□□□□□ -0.54
RAB5B-206ENST00000549505 XDHP47989 1333 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
RAB5B-206ENST00000549505 SEC23AQ15436 765 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 KRT27Q7Z3Y8 459 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 RBM27Q9P2N5 1060 aaKnown RBP11.7□□□□□ -0.54
RAB5B-206ENST00000549505 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-206ENST00000549505 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
RAB5B-206ENST00000549505 NKX2-3Q8TAU0 364 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 NAPBQ9H115 298 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 ATP8A2Q9NTI2 1148 aa11.7□□□□□ -0.54
RAB5B-206ENST00000549505 MAGEB6P1A0A0J9YX57 407 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 FAM237AA0A1B0GTK4 181 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 SNAP23O00161 211 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 BBOX1O75936 387 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 GYG1P46976 350 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 FAM163AQ96GL9 167 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-206ENST00000549505 ARMT1Q9H993 441 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 DDX19AQ9NUU7 478 aaKnown RBP11.69□□□□□ -0.54
RAB5B-206ENST00000549505 KLF18A0A0U1RQI7 1052 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-206ENST00000549505 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
RAB5B-206ENST00000549505 ZNF396Q96N95 335 aaPredicted RBP11.69□□□□□ -0.54
RAB5B-206ENST00000549505 TSPY26PQ9H489 355 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 YEATS4O95619 227 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 IFNAR1P17181 557 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 PPARAQ07869 468 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 PROM2Q8N271 834 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 CNBD1Q8NA66 436 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 LRRC2Q9BYS8 371 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 PANK2Q9BZ23 570 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 SLC4A4Q9Y6R1 1079 aa11.69□□□□□ -0.54
RAB5B-206ENST00000549505 COL11A2P13942 1736 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-206ENST00000549505 CYP7A1P22680 504 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.547e-6■■□□□ 14.4
RAB5B-206ENST00000549505 STK3Q13188 491 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 WDR66Q8TBY9 1149 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
RAB5B-206ENST00000549505 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-206ENST00000549505 KCNQ4P56696 695 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 MFSD6Q6ZSS7 791 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 FAM177A1Q8N128 213 aaPredicted RBP11.68□□□□□ -0.54
RAB5B-206ENST00000549505 PGBD1Q96JS3 809 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
RAB5B-206ENST00000549505 FAM177BA6PVY3 158 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 HAND2P61296 217 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 ELOA2Q8IYF1 753 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 FLAD1Q8NFF5 587 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 FAM205AQ6ZU69 1335 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 SYCE3A1L190 88 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 CAVIN2O95810 425 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 RBM6P78332 1123 aaKnown RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 ZNF772Q68DY9 489 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms