RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SLIT3O75094 1523 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 RAB11FIP4Q86YS3 637 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 INTS13Q9NVM9 706 aa26.55■■□□□ 1.84
NPAS3-206ENST00000548645 FOXO4P98177 505 aa26.54■■□□□ 1.84
NPAS3-206ENST00000548645 NFATC2IPQ8NCF5 419 aa26.54■■□□□ 1.84
NPAS3-206ENST00000548645 VPS37DQ86XT2 251 aa26.54■■□□□ 1.84
NPAS3-206ENST00000548645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.54■■□□□ 1.84
NPAS3-206ENST00000548645 KIFC2Q96AC6 838 aa26.54■■□□□ 1.84
NPAS3-206ENST00000548645 PIP4K2AP48426 406 aaPredicted RBP26.53■■□□□ 1.84
NPAS3-206ENST00000548645 PTPAQ15257 358 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 ZSCAN26Q16670 478 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 PTPN21Q16825 1174 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 METTL16Q86W50 562 aaKnown RBP26.53■■□□□ 1.84
NPAS3-206ENST00000548645 CNNM3Q8NE01 707 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 EXOC4Q96A65 974 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 CWC15Q9P013 229 aaKnown RBP26.53■■□□□ 1.84
NPAS3-206ENST00000548645 SPEF2Q9C093 1822 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 WDR19Q8NEZ3 1342 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 ALG1Q9BT22 464 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 PSD3Q9NYI0 1048 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 PCDHA5Q9Y5H7 936 aa26.53■■□□□ 1.84
NPAS3-206ENST00000548645 CCDC151A5D8V7 595 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 FGAP02671 866 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 TXLNAP40222 546 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 ANTXR2P58335 489 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 ESCO1Q5FWF5 840 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 SPECC1LQ69YQ0 1117 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 CUTAO60888 179 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 ZFYP08048 801 aaPredicted RBP26.52■■□□□ 1.84
NPAS3-206ENST00000548645 WASHC4Q2M389 1173 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 TOGARAM2Q6ZUX3 1019 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 TC2NQ8N9U0 490 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 PLBD2Q8NHP8 589 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 BRD3Q15059 726 aa26.52■■□□□ 1.84
NPAS3-206ENST00000548645 HOOK1Q9UJC3 728 aaKnown RBP26.52■■□□□ 1.84
NPAS3-206ENST00000548645 A0A1B0GUL7 405 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 TTC5Q8N0Z6 440 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 CDKL5O76039 1030 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 LONRF2Q1L5Z9 754 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 LONRF3Q496Y0 759 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 DHX58Q96C10 678 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 KCNH3Q9ULD8 1083 aa26.51■■□□□ 1.83
NPAS3-206ENST00000548645 CAMTA1Q9Y6Y1 1673 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 H7C1W4 665 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 EYA2O00167 538 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 FOXP2O15409 715 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 KRT40Q6A162 431 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 FOXP4Q8IVH2 680 aaPredicted RBP26.5■■□□□ 1.83
NPAS3-206ENST00000548645 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.5■■□□□ 1.83
NPAS3-206ENST00000548645 FKBP4Q02790 459 aaKnown RBP eCLIP26.5■■□□□ 1.83
NPAS3-206ENST00000548645 ELOA2Q8IYF1 753 aaPredicted RBP26.5■■□□□ 1.83
NPAS3-206ENST00000548645 MAP3K14Q99558 947 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 TMEM94Q12767 1356 aa26.5■■□□□ 1.83
NPAS3-206ENST00000548645 GOLGA5Q8TBA6 731 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 CCDC12Q8WUD4 166 aaPredicted RBP26.49■■□□□ 1.83
NPAS3-206ENST00000548645 CLIC6Q96NY7 704 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 ADAM21Q9UKJ8 722 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 ZMYM6O95789 1325 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 KDM6AO15550 1401 aaPredicted RBP26.49■■□□□ 1.83
NPAS3-206ENST00000548645 ZNF213O14771 459 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 ADKP55263 362 aaKnown RBP26.49■■□□□ 1.83
NPAS3-206ENST00000548645 PDE4BQ07343 736 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 TRIM34Q9BYJ4 488 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 CPLX2Q6PUV4 134 aaKnown RBP26.49■■□□□ 1.83
NPAS3-206ENST00000548645 RAPGEF4Q8WZA2 1011 aa26.49■■□□□ 1.83
NPAS3-206ENST00000548645 CPDO75976 1380 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 CCDC191Q8NCU4 936 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 AIFM3Q96NN9 605 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 DACH1Q9UI36 760 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 ARFGEF2Q9Y6D5 1785 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 NWD2Q9ULI1 1742 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 AXIN2Q9Y2T1 843 aa26.48■■□□□ 1.83
NPAS3-206ENST00000548645 BMP6P22004 513 aa26.47■■□□□ 1.83
NPAS3-206ENST00000548645 LRRC24Q50LG9 513 aa26.47■■□□□ 1.83
NPAS3-206ENST00000548645 MAP2K7O14733 419 aa26.47■■□□□ 1.83
NPAS3-206ENST00000548645 CDC27P30260 824 aa26.47■■□□□ 1.83
NPAS3-206ENST00000548645 NFE2L3Q9Y4A8 694 aa26.47■■□□□ 1.83
NPAS3-206ENST00000548645 ZNF18P17022 549 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 METAP2P50579 478 aaKnown RBP eCLIP26.46■■□□□ 1.83
NPAS3-206ENST00000548645 HSP90AA4PQ58FG1 418 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 CCDC175P0C221 793 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 CHMP4BP1P59074 171 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 TRDNQ13061 729 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 KARSQ15046 597 aaKnown RBP26.46■■□□□ 1.83
NPAS3-206ENST00000548645 MLKLQ8NB16 471 aa26.46■■□□□ 1.83
NPAS3-206ENST00000548645 ENOX1Q8TC92 643 aaKnown RBP26.46■■□□□ 1.83
NPAS3-206ENST00000548645 CIAO1O76071 339 aa26.45■■□□□ 1.83
NPAS3-206ENST00000548645 PHKG2P15735 406 aa26.45■■□□□ 1.83
NPAS3-206ENST00000548645 LMAN1P49257 510 aa26.45■■□□□ 1.83
NPAS3-206ENST00000548645 SRGAP1Q7Z6B7 1085 aa26.45■■□□□ 1.83
NPAS3-206ENST00000548645 HNRNPLLQ8WVV9 542 aaKnown RBP26.45■■□□□ 1.83
NPAS3-206ENST00000548645 SCN11AQ9UI33 1791 aa26.45■■□□□ 1.83
NPAS3-206ENST00000548645 ANGEL1Q9UNK9 670 aaKnown RBP26.45■■□□□ 1.83
NPAS3-206ENST00000548645 POTEB2H3BUK9 544 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 TRIM29Q14134 588 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 APPBP2Q92624 585 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 DESI2Q9BSY9 194 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 RASSF4Q9H2L5 321 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 C4AP0C0L4 1744 aa26.45■■□□□ 1.82
NPAS3-206ENST00000548645 C4BP0C0L5 1744 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms