RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 KCNB2Q92953 911 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 FAXDC2Q96IV6 333 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 RBM28Q9NW13 759 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 AP1ARQ63HQ0 302 aa13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 PHAXQ9H814 394 aaKnown RBP13.58□□□□□ -0.24
RBFOX1-208ENST00000547372 SYF2O95926 243 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 ENGASEQ8NFI3 743 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 KIF9Q9HAQ2 790 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 GCFC2P16383 781 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 SF3A3Q12874 501 aaKnown RBP eCLIP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 KCTD16Q68DU8 428 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 A0A1B0GUA9 196 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 ENC1O14682 589 aa13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 SSR1P43307 286 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-208ENST00000547372 CAND2O75155 1236 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 AP1G2O75843 785 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 ANKRD18AQ8IVF6 992 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 TBC1D31Q96DN5 1066 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 NLRP12P59046 1061 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 PDCLQ13371 301 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 KLC4Q9NSK0 619 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 PPLO60437 1756 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 HIP1O00291 1037 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 NCAPHQ15003 741 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 VSTM4Q8IW00 320 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 TRMT44Q8IYL2 757 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 CCDC114Q96M63 670 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 NEK1Q96PY6 1258 aa13.56□□□□□ -0.24
RBFOX1-208ENST00000547372 PDHBP11177 359 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 EZRP15311 586 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 MYL5Q02045 173 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 IFT88Q13099 833 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 FMR1NBQ8N0W7 255 aaPredicted RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 CAGE1Q8TC20 777 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 ZBTB10Q96DT7 871 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 EIF4E1BA6NMX2 242 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 CDC25CP30307 473 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 ADD1P35611 737 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 SNX1Q13596 522 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 EME2A4GXA9 379 aaPredicted RBP13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 GOLGA6BA6NDN3 693 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 PNOCQ13519 176 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 KLHL10Q6JEL2 608 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 RUFY1Q96T51 708 aa13.55□□□□□ -0.24
RBFOX1-208ENST00000547372 CDHR2Q9BYE9 1310 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 ABL1P00519 1130 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 FCHSD1Q86WN1 690 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 PPFIBP1Q86W92 1011 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 MCM8Q9UJA3 840 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 CHD1O14646 1710 aa13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 ZCCHC11Q5TAX3 1644 aaKnown RBP13.54□□□□□ -0.24
RBFOX1-208ENST00000547372 STX10O60499 249 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 SRGAP2O75044 1071 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 BPIFA3Q9BQP9 254 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 SPATS2LQ9NUQ6 558 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 RAB21Q9UL25 225 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 PTPDC1A2A3K4 754 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 NLRP6P59044 892 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 MTHFSDQ2M296 383 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 PLCD4Q9BRC7 762 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 GUCA1BQ9UMX6 200 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 NPATQ14207 1427 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 MAP3K5Q99683 1374 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 USP5P45974 858 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 POLA2Q14181 598 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 CCDC40Q4G0X9 1142 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 ATP7BP35670 1465 aa13.53□□□□□ -0.24
RBFOX1-208ENST00000547372 KIF4AO95239 1232 aa13.52□□□□□ -0.24
RBFOX1-208ENST00000547372 PIP4K2BP78356 416 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms