RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 SLC5A1P13866 664 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 PDE6AP16499 860 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 FGFR2P21802 821 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.3
LETMD1-209ENST00000547318 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 STRN4Q9NRL3 753 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 HOOK1Q9UJC3 728 aaKnown RBP16.92■□□□□ 0.3
LETMD1-209ENST00000547318 ASAP1Q9ULH1 1129 aa16.92■□□□□ 0.3
LETMD1-209ENST00000547318 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 TCRBV5S4A2TA0A5A2 114 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 NYAP1Q6ZVC0 841 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 TUBE1Q9UJT0 475 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 HPSEQ9Y251 543 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 LAMB2P55268 1798 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 NEDD4P46934 1319 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 CHD4Q14839 1912 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 CBFA2T2O43439 604 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 CUTAO60888 179 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 PFKFB1P16118 471 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 TMTC2Q8N394 836 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 STRBPQ96SI9 672 aaKnown RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 FEZ1Q99689 392 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 NBPF3Q9H094 633 aa16.91■□□□□ 0.3
LETMD1-209ENST00000547318 GPHNQ9NQX3 736 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 MORC2Q9Y6X9 1032 aaPredicted RBP16.91■□□□□ 0.3
LETMD1-209ENST00000547318 ECM29Q5VYK3 1845 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 COL22A1Q8NFW1 1626 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-209ENST00000547318 PSDA5PKW4 1024 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-209ENST00000547318 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
LETMD1-209ENST00000547318 SYKP43405 635 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 CCZ1BP86790 482 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
LETMD1-209ENST00000547318 PTPN14Q15678 1187 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 VPS37DQ86XT2 251 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 ZNF34Q8IZ26 560 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 PIH1D3Q9NQM4 214 aaKnown RBP16.9■□□□□ 0.3
LETMD1-209ENST00000547318 PNPLA7Q6ZV29 1317 aa16.9■□□□□ 0.3
LETMD1-209ENST00000547318 IDH1O75874 414 aaKnown RBP16.89■□□□□ 0.29
LETMD1-209ENST00000547318 GNL2Q13823 731 aaKnown RBP16.89■□□□□ 0.29
LETMD1-209ENST00000547318 SART3Q15020 963 aaKnown RBP16.89■□□□□ 0.29
LETMD1-209ENST00000547318 PPP2R5BQ15173 497 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 KRT40Q6A162 431 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 IGDCC4Q8TDY8 1250 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 RREB1Q92766 1687 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 CCDC196A0A1B0GTZ2 297 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 KIF28PB7ZC32 967 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 APPP05067 770 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 HLFQ16534 295 aa16.89■□□□□ 0.29
LETMD1-209ENST00000547318 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
LETMD1-209ENST00000547318 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 SSRP1Q08945 709 aaKnown RBP16.88■□□□□ 0.29
LETMD1-209ENST00000547318 DPCR1Q3MIW9 517 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 RESP18Q5W5W9 173 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 CYB5R4Q7L1T6 521 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
LETMD1-209ENST00000547318 NAPBQ9H115 298 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 LY9Q9HBG7 655 aa16.88■□□□□ 0.29
LETMD1-209ENST00000547318 STRCQ7RTU9 1775 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 FMNL1O95466 1100 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 IFNAR1P17181 557 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 PTPAQ15257 358 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 NTRK3Q16288 839 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 TMEM67Q5HYA8 995 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 CCAR2Q8N163 923 aaKnown RBP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 SPATA5Q8NB90 893 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 GPTP24298 496 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 PHKA1P46020 1223 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 TRIM22Q8IYM9 498 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 KIF18AQ8NI77 898 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 STAG1Q8WVM7 1258 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
LETMD1-209ENST00000547318 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 BCORQ6W2J9 1755 aa16.87■□□□□ 0.29
LETMD1-209ENST00000547318 B4E1Z4 1266 aa16.86■□□□□ 0.29
LETMD1-209ENST00000547318 SFPQP23246 707 aaKnown RBP eCLIP16.86■□□□□ 0.29
LETMD1-209ENST00000547318 AKNAD1Q5T1N1 836 aa16.86■□□□□ 0.29
LETMD1-209ENST00000547318 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
LETMD1-209ENST00000547318 FILIP1Q7Z7B0 1213 aa16.86■□□□□ 0.29
LETMD1-209ENST00000547318 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
LETMD1-209ENST00000547318 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
LETMD1-209ENST00000547318 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms