RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 E7EWF7 191 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 PCP11498 1178 aaKnown RBP13.17□□□□□ -0.3
LINC00485-201ENST00000547179 NT5C2P49902 561 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 SPRYD3Q8NCJ5 442 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
LINC00485-201ENST00000547179 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 AOC3Q16853 763 aa13.17□□□□□ -0.3
LINC00485-201ENST00000547179 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 PPP4CP60510 307 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 CHMP5Q9NZZ3 219 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 RBM5P52756 815 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 NAP1L2Q9ULW6 460 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 COL11A2P13942 1736 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 BTDP43251 543 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
LINC00485-201ENST00000547179 ALDH8A1Q9H2A2 487 aaPredicted RBP13.16□□□□□ -0.3
LINC00485-201ENST00000547179 GSG1L2A8MUP6 293 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 PDE4BQ07343 736 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 OGFOD1Q8N543 542 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 KIF3AQ9Y496 699 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 AK2P54819 239 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 HDLBPQ00341 1268 aaKnown RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 TMX3Q96JJ7 454 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 TMOD2Q9NZR1 351 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
LINC00485-201ENST00000547179 ADCK5Q3MIX3 580 aa13.15□□□□□ -0.3
LINC00485-201ENST00000547179 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
LINC00485-201ENST00000547179 PPARAQ07869 468 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 HHIPL2Q6UWX4 724 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 ESR2Q92731 530 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
LINC00485-201ENST00000547179 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 GPR75-ASB3A0A0A6YYF3 556 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 PRKAB2O43741 272 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 TNIP1Q15025 636 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 DIXDC1Q155Q3 683 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 RRP12Q5JTH9 1297 aaKnown RBP13.14□□□□□ -0.31
LINC00485-201ENST00000547179 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 MRIQ9BWK5 157 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 ZNRF3Q9ULT6 936 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 WDR19Q8NEZ3 1342 aa13.14□□□□□ -0.31
LINC00485-201ENST00000547179 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
LINC00485-201ENST00000547179 NUCB2P80303 420 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
LINC00485-201ENST00000547179 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 DOCK2Q92608 1830 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 KCNA3P22001 575 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 Q6ZUG5 572 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 UBAC1Q9BSL1 405 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
LINC00485-201ENST00000547179 SMC3Q9UQE7 1217 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 PRC1O43663 620 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 MMP14P50281 582 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 CCDC178Q5BJE1 867 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 TTC14Q96N46 770 aa13.13□□□□□ -0.31
LINC00485-201ENST00000547179 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
LINC00485-201ENST00000547179 TTC6Q86TZ1 520 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 IQCA1Q86XH1 822 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 TRIM34Q9BYJ4 488 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 USP17L21D6R901 530 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 SLC51AQ86UW1 340 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 STAG1Q8WVM7 1258 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
LINC00485-201ENST00000547179 HLA-DOAP06340 250 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 CPA1P15085 419 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 TGFBRAP1Q8WUH2 860 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
LINC00485-201ENST00000547179 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 GAKO14976 1311 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 CACNA1SQ13698 1873 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 PTGER2P43116 358 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 CIAPIN1Q6FI81 312 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 BRF1Q92994 677 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 MKNK2Q9HBH9 465 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 EPB41L4AQ9HCS5 686 aaPredicted RBP13.11□□□□□ -0.31
LINC00485-201ENST00000547179 ANAPC4Q9UJX5 808 aa13.11□□□□□ -0.31
LINC00485-201ENST00000547179 DAGLAQ9Y4D2 1042 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms