RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 INHBEP58166 350 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 SETQ01105 290 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 TFCP2Q12800 502 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 RESTQ13127 1097 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 RABL6Q3YEC7 729 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 COPS6Q7L5N1 327 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 FAN1Q9Y2M0 1017 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 KLHL33A6NCF5 533 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 NR1I2O75469 434 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 USP8P40818 1118 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 CCDC129Q6ZRS4 1044 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 NBPF11Q86T75 865 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 NBPF5PQ86XG9 351 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 SPATA32Q96LK8 384 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 SEC62Q99442 399 aaKnown RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 SCAND2PQ9GZW5 306 aaPredicted RBP9.05□□□□□ -0.96
UBR1-202ENST00000546274 CLSTN2Q9H4D0 955 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 UBR2Q8IWV8 1755 aa9.05□□□□□ -0.96
UBR1-202ENST00000546274 CYP21A2P08686 494 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 ARMC3Q5W041 872 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 STOX1Q6ZVD7 989 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 GNL3LQ9NVN8 582 aaKnown RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 KIF3CO14782 793 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 ELF1P32519 619 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 PIP4K2AP48426 406 aaPredicted RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 CASP7P55210 303 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 CCZ1BP86790 482 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 CCZ1P86791 482 aaPredicted RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 CCDC93Q567U6 631 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 KCNV1Q6PIU1 500 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 ZNF496Q96IT1 587 aaPredicted RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 FUT8Q9BYC5 575 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
UBR1-202ENST00000546274 MKRN1Q9UHC7 482 aaKnown RBP9.04□□□□□ -0.96
UBR1-202ENST00000546274 ATP8B1O43520 1251 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 CPP00450 1065 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 PHKG2P15735 406 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
UBR1-202ENST00000546274 TBC1D22AQ8WUA7 517 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 FBXW7Q969H0 707 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 NEK1Q96PY6 1258 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 RABEP2Q9H5N1 569 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 GOLGA6L4A6NEF3 574 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 RDXP35241 583 aaKnown RBP9.03□□□□□ -0.96
UBR1-202ENST00000546274 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 SCRN1Q12765 414 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 Q6ZUG5 572 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 KIRREL3Q8IZU9 778 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 BRF1Q92994 677 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 DDX11Q96FC9 970 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 PPP1R13BQ96KQ4 1090 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 HAUS7Q99871 368 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 TTC36A6NLP5 189 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 NEMFO60524 1076 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 SKAP2O75563 359 aaPredicted RBP9.03□□□□□ -0.96
UBR1-202ENST00000546274 NF2P35240 595 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 LONRF2Q1L5Z9 754 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 C11orf91Q3C1V1 193 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 CCDC158Q5M9N0 1113 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 WWC2Q6AWC2 1192 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 TDRD7Q8NHU6 1098 aaKnown RBP9.03□□□□□ -0.96
UBR1-202ENST00000546274 SMARCC2Q8TAQ2 1214 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 PARD6BQ9BYG5 372 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 DDX19AQ9NUU7 478 aaKnown RBP9.03□□□□□ -0.96
UBR1-202ENST00000546274 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
UBR1-202ENST00000546274 TADA3O75528 432 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 CTDNEP1O95476 244 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 KRT32Q14532 448 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 ZKSCAN8Q15776 578 aaPredicted RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 E4F1Q66K89 784 aaPredicted RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 CNNM3Q8NE01 707 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 THOC1Q96FV9 657 aaKnown RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 NEDD9Q14511 834 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 AP1ARQ63HQ0 302 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 UBE3BQ7Z3V4 1068 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 SH3TC1Q8TE82 1336 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 PALLDQ8WX93 1383 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 PAPPAQ13219 1627 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 A0A0G2JLW4 131 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 MCMDC2Q4G0Z9 681 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 ZC3H12AQ5D1E8 599 aaKnown RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 DDX46Q7L014 1031 aaKnown RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 TRIM6Q9C030 488 aaPredicted RBP9.02□□□□□ -0.97
UBR1-202ENST00000546274 CD248Q9HCU0 757 aa9.02□□□□□ -0.97
UBR1-202ENST00000546274 TNS3Q68CZ2 1445 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 BECN2A8MW95 431 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 CCNHP51946 323 aaPredicted RBP9.01□□□□□ -0.97
UBR1-202ENST00000546274 EIF5P55010 431 aaKnown RBP9.01□□□□□ -0.97
UBR1-202ENST00000546274 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 LMOD2Q6P5Q4 547 aa9.01□□□□□ -0.97
UBR1-202ENST00000546274 ITFG2Q969R8 447 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms